Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU1-130P-201ENST00000363930 160 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU1-146P-201ENST00000364015 165 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU6-1243P-201ENST00000364028 107 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 Y_RNA.286-201ENST00000364813 102 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU1-136P-201ENST00000384181 164 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU6-429P-201ENST00000384582 108 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNA5SP487-201ENST00000410186 122 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU2-50P-201ENST00000410494 143 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 MTND4LP9-201ENST00000427694 174 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 TOMM20P4-201ENST00000427861 435 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RNU7-87P-201ENST00000459343 62 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC010326.1-201ENST00000462726 602 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 RPS27AP1-201ENST00000475545 471 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 TRAV32-201ENST00000553993 340 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 TUG1_4.1-201ENST00000619464 181 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC087385.3-201ENST00000620477 187 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AC138965.3-201ENST00000623875 498 ntBASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.73□□□□□ -1.49
CTC1Q2NKJ3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC144833.1-201ENST00000567953 4089 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RNU6-834P-201ENST00000362367 110 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RNU1-32P-201ENST00000363937 159 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RNU6-270P-201ENST00000364131 105 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RNU6-701P-201ENST00000384059 107 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 Y_RNA.480-201ENST00000384364 102 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RNY3P4-201ENST00000384428 101 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AL078599.1-201ENST00000402075 293 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AL358176.3-201ENST00000420757 454 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 GSTM5P1-201ENST00000434751 660 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC079168.2-201ENST00000453977 416 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC009127.1-201ENST00000467090 155 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RN7SL481P-201ENST00000477764 299 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 HMGB1P21-201ENST00000502313 581 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 FTH1P24-201ENST00000503502 462 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 FTH1P11-201ENST00000517577 551 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC087369.1-201ENST00000520775 996 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 RN7SL802P-201ENST00000577858 299 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC008745.1-201ENST00000604064 271 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AL008718.3-201ENST00000610217 321 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC116447.1-201ENST00000613153 453 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 Y_RNA.778-201ENST00000620203 90 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC091905.4-201ENST00000623432 202 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC008873.1-201ENST00000625051 138 ntBASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTC1Q2NKJ3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 MFSD8-216ENST00000641147 4009 ntBASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 AC018809.2-201ENST00000602436 3823 ntBASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CTC1Q2NKJ3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 MTND5P9-201ENST00000503854 1755 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 SNORA25.1-201ENST00000362326 128 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 SNORA70.6-201ENST00000383934 134 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 TMSB10P2-201ENST00000416049 131 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 AC092573.2-201ENST00000434546 243 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.71□□□□□ -1.5
CTC1Q2NKJ3 NOP56P2-201ENST00000447491 769 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms