Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMC1AQ14683 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
SMC1AQ14683 AL136360.1-201ENST00000503377 1900 ntBASIC3.19□□□□□ -1.9
SMC1AQ14683 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SMC1AQ14683 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AL161431.1-201ENST00000618966 4205 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SMC1AQ14683 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMC1AQ14683 RNU4-92P-201ENST00000363783 136 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AL356057.2-201ENST00000403318 432 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 ATP5F1P1-201ENST00000433775 569 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 ARPC3P5-201ENST00000448802 534 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RPL18AP17-201ENST00000455326 198 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 USP9YP25-201ENST00000457708 443 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 MTND1P16-201ENST00000465177 898 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RPL31P41-201ENST00000477967 372 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RPL23AP70-201ENST00000483361 460 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC1AQ14683 MTND2P32-201ENST00000521584 1038 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 AP000857.1-201ENST00000532151 543 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC1AQ14683 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SMC1AQ14683 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC1AQ14683 BBIP1P1-201ENST00000602999 279 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 AC105148.1-201ENST00000604961 409 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 AL450336.1-201ENST00000605180 586 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMC1AQ14683 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AC116618.1-201ENST00000634617 774 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMC1AQ14683 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMC1AQ14683 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC1AQ14683 AL022578.1-201ENST00000439330 1433 ntBASIC3.18□□□□□ -1.9
SMC1AQ14683 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMC1AQ14683 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SMC1AQ14683 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC1AQ14683 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 Y_RNA.548-201ENST00000384656 105 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 RN7SKP284-201ENST00000411002 343 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC1AQ14683 USP9YP11-201ENST00000427537 717 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC1AQ14683 RPL36AP6-201ENST00000435770 321 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC1AQ14683 WASF1P1-201ENST00000447560 1131 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC1AQ14683 RN7SL297P-201ENST00000483161 293 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 LARP1BP2-201ENST00000486594 519 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 FAM172BP-201ENST00000487497 1089 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC1AQ14683 HIGD1AP13-201ENST00000509878 289 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC1AQ14683 AC116353.3-201ENST00000511215 249 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.17□□□□□ -1.9
SMC1AQ14683 ELOCP31-201ENST00000540463 467 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMC1AQ14683 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMC1AQ14683 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
SMC1AQ14683 AGGF1P5-201ENST00000567900 919 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 RPL23AP84-201ENST00000571193 464 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC138761.3-201ENST00000579993 334 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.17□□□□□ -1.9
SMC1AQ14683 ATP1B3P1-201ENST00000605365 821 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC1AQ14683 AL357080.1-201ENST00000617394 239 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AL603758.1-201ENST00000618654 241 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC006386.1-201ENST00000619436 415 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC109809.1-201ENST00000619665 545 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 MIR4275-201ENST00000636486 87 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
SMC1AQ14683 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMC1AQ14683 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMC1AQ14683 AC006378.2-201ENST00000623178 2476 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 RPL9P7-201ENST00000330965 580 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMC1AQ14683 RNU5E-8P-201ENST00000363502 116 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMC1AQ14683 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC1AQ14683 AL139413.1-201ENST00000421309 217 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 MTCYBP3-201ENST00000445588 1137 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.16□□□□□ -1.9
SMC1AQ14683 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC1AQ14683 RPS15AP27-201ENST00000449183 343 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RPL21P134-201ENST00000453468 483 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
SMC1AQ14683 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC1AQ14683 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms