Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.6□□□□□ -1.67
HERVK_113P62684 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.6□□□□□ -1.67
HERVK_113P62684 SETP7-201ENST00000552169 453 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 MIR4458-201ENST00000578872 75 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AL355812.1-201ENST00000603215 216 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AL008729.2-201ENST00000606393 473 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 AL034408.1-202ENST00000636088 415 ntBASIC4.6□□□□□ -1.67
HERVK_113P62684 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HERVK_113P62684 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERVK_113P62684 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERVK_113P62684 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HERVK_113P62684 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.59□□□□□ -1.67
HERVK_113P62684 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.59□□□□□ -1.67
HERVK_113P62684 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HERVK_113P62684 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERVK_113P62684 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERVK_113P62684 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.59□□□□□ -1.67
HERVK_113P62684 Y_RNA.419-201ENST00000384041 102 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.59□□□□□ -1.67
HERVK_113P62684 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HERVK_113P62684 AL136372.1-201ENST00000403060 228 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 RNU2-36P-201ENST00000410361 191 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 RNA5SP107-201ENST00000411358 122 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 MTND3P8-201ENST00000412909 339 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.59□□□□□ -1.67
HERVK_113P62684 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.59□□□□□ -1.67
HERVK_113P62684 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.59□□□□□ -1.67
HERVK_113P62684 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.59□□□□□ -1.67
HERVK_113P62684 AC007547.1-201ENST00000462177 490 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 PPIAP15-201ENST00000479662 484 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 RPL21P99-201ENST00000480369 423 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AC135721.1-201ENST00000497954 479 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.59□□□□□ -1.67
HERVK_113P62684 SCARNA15.1-201ENST00000516384 125 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 RNA5SP503-201ENST00000517047 117 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 RNU6-64P-201ENST00000517119 105 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 SCOCP1-201ENST00000554676 349 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.59□□□□□ -1.67
HERVK_113P62684 AC005034.5-201ENST00000604219 466 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AL031176.1-201ENST00000604554 466 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AC012468.1-201ENST00000604888 430 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AL158196.1-201ENST00000616786 434 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AC126177.8-201ENST00000618339 1015 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 AC012314.7-201ENST00000619693 93 ntBASIC4.59□□□□□ -1.67
HERVK_113P62684 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HERVK_113P62684 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERVK_113P62684 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 PABPC1P7-201ENST00000413177 1513 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AP004289.2-201ENST00000444413 1457 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 SNORA63-201ENST00000363450 132 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU6-263P-201ENST00000363811 107 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNA5SP399-201ENST00000364003 117 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 SNORA51.2-201ENST00000364595 132 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 Y_RNA.373-201ENST00000365600 103 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU4-20P-201ENST00000365601 151 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU6-1029P-201ENST00000384109 107 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AL606923.1-201ENST00000406616 190 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 MIR1250-201ENST00000408098 113 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 SNORA3.3-201ENST00000408712 125 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU4-26P-201ENST00000410270 107 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU6-193P-201ENST00000410977 107 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.58□□□□□ -1.68
HERVK_113P62684 AC018630.2-202ENST00000422992 927 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 HMGB3P22-202ENST00000451823 572 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC234775.1-201ENST00000454247 670 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC233279.1-201ENST00000455300 423 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.58□□□□□ -1.68
HERVK_113P62684 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RN7SKP219-201ENST00000516825 296 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.58□□□□□ -1.68
HERVK_113P62684 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.58□□□□□ -1.68
HERVK_113P62684 CR383656.7-201ENST00000548164 174 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.58□□□□□ -1.68
HERVK_113P62684 MIR4742-201ENST00000581069 85 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 AL161756.2-201ENST00000604597 246 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 RNU6-89P-201ENST00000606519 100 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC005344.1-201ENST00000613391 459 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AC084757.4-201ENST00000616350 526 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 MIR7702-201ENST00000621931 59 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AL160413.1-201ENST00000622780 310 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.58□□□□□ -1.68
HERVK_113P62684 U6.114-201ENST00000636407 96 ntBASIC4.58□□□□□ -1.68
HERVK_113P62684 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.58□□□□□ -1.68
HERVK_113P62684 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.58□□□□□ -1.68
HERVK_113P62684 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HERVK_113P62684 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms