Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HSPE1P11-201ENST00000339579 310 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 RNY4P34-201ENST00000364779 95 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.42□□□□□ -1.86
RPS3AP61247 MIR134-201ENST00000385258 73 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 MIR325-201ENST00000385260 98 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AL136116.1-201ENST00000403591 381 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 NDUFS5P1-201ENST00000405668 289 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS3AP61247 RNU2-36P-201ENST00000410361 191 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPS3AP61247 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.42□□□□□ -1.86
RPS3AP61247 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS3AP61247 AC007919.1-201ENST00000429380 217 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC009961.2-201ENST00000435771 251 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 RPL23AP22-201ENST00000437556 453 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 BNIP3P2-201ENST00000441221 577 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS3AP61247 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS3AP61247 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.42□□□□□ -1.86
RPS3AP61247 AL122001.1-201ENST00000457027 370 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 MTND4LP3-201ENST00000468320 276 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 RAP1BP2-201ENST00000478270 544 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AL135752.1-201ENST00000479477 471 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.42□□□□□ -1.86
RPS3AP61247 RN7SL432P-201ENST00000484057 298 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS3AP61247 RNA5SP208-201ENST00000516156 78 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.42□□□□□ -1.86
RPS3AP61247 AC034105.3-201ENST00000565294 442 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 HMGB1P6-201ENST00000569046 646 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC087499.8-201ENST00000578406 226 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC006130.2-201ENST00000586202 326 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC040904.1-201ENST00000590850 223 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 BNIP3P33-201ENST00000598912 569 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.42□□□□□ -1.86
RPS3AP61247 AC080013.6-201ENST00000606185 215 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC110994.2-201ENST00000635481 492 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 AC090582.1-201ENST00000636321 199 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS3AP61247 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS3AP61247 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RPS3AP61247 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
RPS3AP61247 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
RPS3AP61247 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 AC007496.3-201ENST00000624987 3443 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AL137003.2-201ENST00000606924 2538 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.41□□□□□ -1.86
RPS3AP61247 RNU4-40P-201ENST00000364351 143 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 RNU5E-6P-201ENST00000365574 115 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 ELOCP4-201ENST00000420090 333 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC092047.1-201ENST00000424997 240 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
RPS3AP61247 NEK4P1-201ENST00000433383 879 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 MTND4P32-201ENST00000437189 1237 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.41□□□□□ -1.86
RPS3AP61247 PIGFP3-201ENST00000441918 722 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.41□□□□□ -1.86
RPS3AP61247 MTCO1P19-201ENST00000443487 500 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 AL136380.1-201ENST00000447970 162 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC006480.1-201ENST00000449887 378 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC084198.1-201ENST00000477747 402 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 FCF1P3-201ENST00000496394 590 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 MTND4P2-201ENST00000507767 1203 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 SNORA31.3-201ENST00000516029 96 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 RNU7-51P-201ENST00000516560 62 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 SNORA18.6-201ENST00000516792 115 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 RNU6-711P-201ENST00000517255 106 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 AMZ2P1-203ENST00000565833 850 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.41□□□□□ -1.86
RPS3AP61247 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.41□□□□□ -1.86
RPS3AP61247 RSL24D1P11-201ENST00000591045 491 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.41□□□□□ -1.86
RPS3AP61247 AC079089.3-201ENST00000603094 673 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 DPPA3P3-201ENST00000603842 430 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AL161729.4-201ENST00000604650 476 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 AC109347.2-201ENST00000610220 349 ntBASIC3.41□□□□□ -1.86
RPS3AP61247 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPS3AP61247 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.4□□□□□ -1.86
RPS3AP61247 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.4□□□□□ -1.86
RPS3AP61247 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 SNORD56.2-201ENST00000363242 71 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 Y_RNA.201-201ENST00000364052 96 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS3AP61247 RNA5SP31-201ENST00000411144 127 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 MTCO2P34-201ENST00000421994 607 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms