Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ANKRD36P1-201ENST00000344424 659 ntBASIC2.01□□□□□ -2.09
ACTBP60709 RNU5A-1-201ENST00000362698 116 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AL445529.1-201ENST00000398713 389 ntBASIC2.01□□□□□ -2.09
ACTBP60709 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTBP60709 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.01□□□□□ -2.09
ACTBP60709 AL109933.2-201ENST00000452651 260 ntBASIC2.01□□□□□ -2.09
ACTBP60709 SUMO2P2-201ENST00000456482 255 ntBASIC2.01□□□□□ -2.09
ACTBP60709 SUMO2P6-201ENST00000505273 288 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTBP60709 RN7SKP24-201ENST00000515888 284 ntBASIC2.01□□□□□ -2.09
ACTBP60709 RNU6-362P-201ENST00000516736 90 ntBASIC2.01□□□□□ -2.09
ACTBP60709 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ACTBP60709 AC024224.1-201ENST00000538284 609 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTBP60709 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.01□□□□□ -2.09
ACTBP60709 MIR4513-201ENST00000581077 86 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.01□□□□□ -2.09
ACTBP60709 AL445493.3-201ENST00000619568 477 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AC073592.7-201ENST00000623659 507 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.01□□□□□ -2.09
ACTBP60709 AC080128.1-201ENST00000474389 1917 ntBASIC2.01□□□□□ -2.09
ACTBP60709 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
ACTBP60709 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ACTBP60709 MTCO1P4-201ENST00000520516 1409 ntBASIC2□□□□□ -2.09
ACTBP60709 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
ACTBP60709 SUCLA2P2-201ENST00000417269 1309 ntBASIC2□□□□□ -2.09
ACTBP60709 FTLP6-201ENST00000355274 422 ntBASIC2□□□□□ -2.09
ACTBP60709 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
ACTBP60709 UBE2V1P2-201ENST00000397758 440 ntBASIC2□□□□□ -2.09
ACTBP60709 RNU2-28P-201ENST00000410457 189 ntBASIC2□□□□□ -2.09
ACTBP60709 RNA5SP80-201ENST00000410475 111 ntBASIC2□□□□□ -2.09
ACTBP60709 LUZP4P1-201ENST00000415420 344 ntBASIC2□□□□□ -2.09
ACTBP60709 MTCO3P1-205ENST00000422088 832 ntBASIC2□□□□□ -2.09
ACTBP60709 AL121882.1-201ENST00000422893 417 ntBASIC2□□□□□ -2.09
ACTBP60709 SEPT14P24-201ENST00000447236 180 ntBASIC2□□□□□ -2.09
ACTBP60709 COX6CP18-201ENST00000448769 222 ntBASIC2□□□□□ -2.09
ACTBP60709 AC008379.1-201ENST00000463655 464 ntBASIC2□□□□□ -2.09
ACTBP60709 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2□□□□□ -2.09
ACTBP60709 AC004263.1-201ENST00000479327 332 ntBASIC2□□□□□ -2.09
ACTBP60709 AC013828.1-201ENST00000481845 158 ntBASIC2□□□□□ -2.09
ACTBP60709 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
ACTBP60709 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2□□□□□ -2.09
ACTBP60709 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2□□□□□ -2.09
ACTBP60709 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
ACTBP60709 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2□□□□□ -2.09
ACTBP60709 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2□□□□□ -2.09
ACTBP60709 AC006518.2-201ENST00000542513 940 ntBASIC2□□□□□ -2.09
ACTBP60709 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2□□□□□ -2.09
ACTBP60709 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2□□□□□ -2.09
ACTBP60709 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2□□□□□ -2.09
ACTBP60709 BNIP3P24-201ENST00000593398 557 ntBASIC2□□□□□ -2.09
ACTBP60709 RPAP2P1-201ENST00000603626 1168 ntBASIC2□□□□□ -2.09
ACTBP60709 AC013553.2-201ENST00000604244 589 ntBASIC2□□□□□ -2.09
ACTBP60709 AP003973.1-201ENST00000604639 691 ntBASIC2□□□□□ -2.09
ACTBP60709 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2□□□□□ -2.09
ACTBP60709 DUXAP10-204ENST00000612052 616 ntBASIC2□□□□□ -2.09
ACTBP60709 AC020658.4-201ENST00000613987 684 ntBASIC2□□□□□ -2.09
ACTBP60709 SDR42E1P2-201ENST00000614861 481 ntBASIC2□□□□□ -2.09
ACTBP60709 SDR42E1P4-201ENST00000620894 481 ntBASIC2□□□□□ -2.09
ACTBP60709 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2□□□□□ -2.09
ACTBP60709 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2□□□□□ -2.09
ACTBP60709 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2□□□□□ -2.09
ACTBP60709 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ACTBP60709 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ACTBP60709 AC007785.2-201ENST00000598627 1916 ntBASIC1.99□□□□□ -2.09
ACTBP60709 RNU6-1083P-201ENST00000384022 107 ntBASIC1.99□□□□□ -2.09
ACTBP60709 MIR325-201ENST00000385260 98 ntBASIC1.99□□□□□ -2.09
ACTBP60709 RNU6-220P-201ENST00000390919 107 ntBASIC1.99□□□□□ -2.09
ACTBP60709 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 MTND3P20-201ENST00000407663 186 ntBASIC1.99□□□□□ -2.09
ACTBP60709 SNORA11.2-201ENST00000408318 127 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL592310.1-201ENST00000414330 671 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 MTCYBP32-201ENST00000427945 1084 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL158053.1-201ENST00000441503 453 ntBASIC1.99□□□□□ -2.09
ACTBP60709 OSTCP8-201ENST00000445117 448 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC108938.1-201ENST00000451204 136 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL353691.1-201ENST00000451332 387 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 AC022493.1-201ENST00000492984 337 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC118465.1-201ENST00000513820 1271 ntBASIC1.99□□□□□ -2.09
ACTBP60709 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.99□□□□□ -2.09
ACTBP60709 RNA5SP320-201ENST00000516263 124 ntBASIC1.99□□□□□ -2.09
ACTBP60709 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 AC124947.2-202ENST00000552735 133 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC093510.2-201ENST00000562820 896 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.99□□□□□ -2.09
ACTBP60709 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.99□□□□□ -2.09
ACTBP60709 MIR5571-201ENST00000577998 113 ntBASIC1.99□□□□□ -2.09
ACTBP60709 OR4K8P-201ENST00000578842 1048 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC080013.4-201ENST00000607624 649 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC092954.1-201ENST00000609121 445 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AP001521.1-201ENST00000609150 300 ntBASIC1.99□□□□□ -2.09
ACTBP60709 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AL118508.4-201ENST00000624142 1176 ntBASIC1.99□□□□□ -2.09
ACTBP60709 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms