Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC073063.1-201ENST00000434352 607 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 AC104850.1-201ENST00000435940 476 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC004866.2-201ENST00000438285 481 ntBASIC3.16□□□□□ -1.9
CDH11P55287 RPL26P6-201ENST00000440913 438 ntBASIC3.16□□□□□ -1.9
CDH11P55287 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH11P55287 AC234775.1-201ENST00000454247 670 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 CENPBD1P1-201ENST00000464061 469 ntBASIC3.16□□□□□ -1.9
CDH11P55287 RPL23AP67-201ENST00000465341 474 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC105252.1-201ENST00000503089 286 ntBASIC3.16□□□□□ -1.9
CDH11P55287 KCTD9P5-201ENST00000504141 1170 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH11P55287 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH11P55287 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
CDH11P55287 CDC42P4-201ENST00000510507 563 ntBASIC3.16□□□□□ -1.9
CDH11P55287 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH11P55287 RN7SKP298-201ENST00000515950 94 ntBASIC3.16□□□□□ -1.9
CDH11P55287 RN7SKP244-201ENST00000516513 307 ntBASIC3.16□□□□□ -1.9
CDH11P55287 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
CDH11P55287 RNU6-430P-201ENST00000517078 107 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
CDH11P55287 IGHV3-76-201ENST00000522465 295 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC004024.1-201ENST00000549244 247 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH11P55287 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH11P55287 AL845331.3-202ENST00000562856 261 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH11P55287 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
CDH11P55287 FAM60BP-201ENST00000578364 658 ntBASIC3.16□□□□□ -1.9
CDH11P55287 MIR3682-201ENST00000581338 84 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH11P55287 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
CDH11P55287 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH11P55287 AC103710.2-201ENST00000609912 942 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC013476.2-201ENST00000614456 459 ntBASIC3.16□□□□□ -1.9
CDH11P55287 AC136475.10-201ENST00000620253 385 ntBASIC3.16□□□□□ -1.9
CDH11P55287 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDH11P55287 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH11P55287 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH11P55287 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
CDH11P55287 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH11P55287 AC092447.7-201ENST00000422212 1621 ntBASIC3.15□□□□□ -1.9
CDH11P55287 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH11P55287 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CDH11P55287 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH11P55287 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH11P55287 RNA5SP189-201ENST00000364920 115 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
CDH11P55287 MIR23A-201ENST00000385245 73 ntBASIC3.15□□□□□ -1.91
CDH11P55287 SNORA48.8-201ENST00000391324 134 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AL109755.1-201ENST00000401791 649 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RNU4-65P-201ENST00000410473 140 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC019097.1-201ENST00000424783 735 ntBASIC3.15□□□□□ -1.91
CDH11P55287 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RPL21P112-201ENST00000434403 463 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 AC073614.1-201ENST00000438690 650 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC005094.1-201ENST00000440420 368 ntBASIC3.15□□□□□ -1.91
CDH11P55287 USP9YP15-201ENST00000442391 422 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH11P55287 AL162389.1-201ENST00000449233 177 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC079448.1-201ENST00000449377 373 ntBASIC3.15□□□□□ -1.91
CDH11P55287 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
CDH11P55287 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
CDH11P55287 MTCO2P29-201ENST00000465212 189 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
CDH11P55287 RPL23AP55-201ENST00000498163 452 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH11P55287 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 AC010587.1-201ENST00000505809 469 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CDH11P55287 RANP9-201ENST00000519957 271 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 DEFB108A-201ENST00000530110 222 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH11P55287 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH11P55287 AL391156.1-201ENST00000554965 554 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 MIR3167-201ENST00000579623 85 ntBASIC3.15□□□□□ -1.91
CDH11P55287 MIR3690-201ENST00000580266 75 ntBASIC3.15□□□□□ -1.91
CDH11P55287 NRBF2P1-201ENST00000587407 859 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH11P55287 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH11P55287 AL606834.2-201ENST00000602954 668 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AC012443.1-201ENST00000605605 231 ntBASIC3.15□□□□□ -1.91
CDH11P55287 TUG1_2.1-201ENST00000614234 87 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms