Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.55□□□□□ -2
CDH6P55285 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CDH6P55285 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDH6P55285 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDH6P55285 AC093536.2-201ENST00000565257 1406 ntBASIC2.54□□□□□ -2
CDH6P55285 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
CDH6P55285 RNU6-359P-201ENST00000365466 108 ntBASIC2.54□□□□□ -2
CDH6P55285 RPS4XP8-201ENST00000402039 771 ntBASIC2.54□□□□□ -2
CDH6P55285 AL358075.3-201ENST00000426289 226 ntBASIC2.54□□□□□ -2
CDH6P55285 OR4K11P-201ENST00000431829 904 ntBASIC2.54□□□□□ -2
CDH6P55285 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.54□□□□□ -2
CDH6P55285 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.54□□□□□ -2
CDH6P55285 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.54□□□□□ -2
CDH6P55285 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.54□□□□□ -2
CDH6P55285 AC009296.1-201ENST00000443146 155 ntBASIC2.54□□□□□ -2
CDH6P55285 WASF1P1-201ENST00000447560 1131 ntBASIC2.54□□□□□ -2
CDH6P55285 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
CDH6P55285 RNU7-136P-201ENST00000458819 69 ntBASIC2.54□□□□□ -2
CDH6P55285 AC079203.1-201ENST00000487972 404 ntBASIC2.54□□□□□ -2
CDH6P55285 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.54□□□□□ -2
CDH6P55285 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.54□□□□□ -2
CDH6P55285 SUMO2P5-201ENST00000506790 245 ntBASIC2.54□□□□□ -2
CDH6P55285 AC069306.1-201ENST00000507006 843 ntBASIC2.54□□□□□ -2
CDH6P55285 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.54□□□□□ -2
CDH6P55285 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.54□□□□□ -2
CDH6P55285 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.54□□□□□ -2
CDH6P55285 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CDH6P55285 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
CDH6P55285 AC005498.1-201ENST00000592125 465 ntBASIC2.54□□□□□ -2
CDH6P55285 DUXAP3-201ENST00000603616 594 ntBASIC2.54□□□□□ -2
CDH6P55285 AC112220.2-201ENST00000605513 533 ntBASIC2.54□□□□□ -2
CDH6P55285 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.54□□□□□ -2
CDH6P55285 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDH6P55285 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
CDH6P55285 AL445264.1-201ENST00000621719 171 ntBASIC2.54□□□□□ -2
CDH6P55285 AC007998.5-201ENST00000622938 237 ntBASIC2.54□□□□□ -2
CDH6P55285 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CDH6P55285 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CDH6P55285 RNU5E-8P-201ENST00000363502 116 ntBASIC2.53□□□□□ -2
CDH6P55285 RNU4-51P-201ENST00000364206 140 ntBASIC2.53□□□□□ -2
CDH6P55285 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
CDH6P55285 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.53□□□□□ -2
CDH6P55285 RNU6-741P-201ENST00000383889 107 ntBASIC2.53□□□□□ -2
CDH6P55285 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
CDH6P55285 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
CDH6P55285 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDH6P55285 TPMTP3-201ENST00000411928 735 ntBASIC2.53□□□□□ -2
CDH6P55285 AC092047.1-201ENST00000424997 240 ntBASIC2.53□□□□□ -2
CDH6P55285 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.53□□□□□ -2
CDH6P55285 FCF1P1-201ENST00000432690 571 ntBASIC2.53□□□□□ -2
CDH6P55285 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
CDH6P55285 Z82210.1-201ENST00000440037 231 ntBASIC2.53□□□□□ -2
CDH6P55285 FGF7P5-201ENST00000441829 291 ntBASIC2.53□□□□□ -2
CDH6P55285 CBWD4P-201ENST00000445695 655 ntBASIC2.53□□□□□ -2
CDH6P55285 RPS15AP27-201ENST00000449183 343 ntBASIC2.53□□□□□ -2
CDH6P55285 AC027673.1-201ENST00000456245 405 ntBASIC2.53□□□□□ -2
CDH6P55285 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.53□□□□□ -2
CDH6P55285 AC113347.3-201ENST00000509113 148 ntBASIC2.53□□□□□ -2
CDH6P55285 AC113155.1-201ENST00000511141 769 ntBASIC2.53□□□□□ -2
CDH6P55285 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.53□□□□□ -2
CDH6P55285 RNU4-29P-201ENST00000515943 174 ntBASIC2.53□□□□□ -2
CDH6P55285 RNU6-714P-201ENST00000516963 103 ntBASIC2.53□□□□□ -2
CDH6P55285 UBTFL10-201ENST00000528532 562 ntBASIC2.53□□□□□ -2
CDH6P55285 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.53□□□□□ -2
CDH6P55285 TRAV28-201ENST00000557548 323 ntBASIC2.53□□□□□ -2
CDH6P55285 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.53□□□□□ -2
CDH6P55285 AC061975.8-201ENST00000587058 721 ntBASIC2.53□□□□□ -2
CDH6P55285 AC004987.4-201ENST00000603383 338 ntBASIC2.53□□□□□ -2
CDH6P55285 AC024060.1-201ENST00000607052 494 ntBASIC2.53□□□□□ -2
CDH6P55285 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDH6P55285 AC093838.1-201ENST00000613014 469 ntBASIC2.53□□□□□ -2
CDH6P55285 AC013476.2-201ENST00000614456 459 ntBASIC2.53□□□□□ -2
CDH6P55285 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.53□□□□□ -2
CDH6P55285 AL603758.1-201ENST00000618654 241 ntBASIC2.53□□□□□ -2
CDH6P55285 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.53□□□□□ -2
CDH6P55285 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
CDH6P55285 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
CDH6P55285 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH6P55285 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH6P55285 AC069528.2-201ENST00000624849 1991 ntBASIC2.52□□□□□ -2.01
CDH6P55285 AL022578.1-201ENST00000439330 1433 ntBASIC2.52□□□□□ -2.01
CDH6P55285 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
CDH6P55285 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH6P55285 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CDH6P55285 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CDH6P55285 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.52□□□□□ -2.01
CDH6P55285 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH6P55285 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
CDH6P55285 Y_RNA.548-201ENST00000384656 105 ntBASIC2.52□□□□□ -2.01
CDH6P55285 ANAPC10P1-201ENST00000395991 556 ntBASIC2.52□□□□□ -2.01
CDH6P55285 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
CDH6P55285 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
CDH6P55285 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH6P55285 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH6P55285 AL049734.2-201ENST00000441066 616 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms