Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 BTF3P7-201ENST00000407097 488 ntBASIC3.7□□□□□ -1.82
PMS2P54278 MTND3P17-201ENST00000416968 344 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS2P54278 AC000111.3-201ENST00000433478 193 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.7□□□□□ -1.82
PMS2P54278 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC108734.1-201ENST00000439549 399 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS2P54278 MTND1P9-201ENST00000453775 944 ntBASIC3.7□□□□□ -1.82
PMS2P54278 SNORD121B-201ENST00000458838 81 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC023598.1-201ENST00000472521 361 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC021382.1-201ENST00000483523 359 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS2P54278 AC017037.2-201ENST00000513850 890 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC022616.6-201ENST00000520479 119 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AP003181.2-201ENST00000528941 181 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS2P54278 SETP2-201ENST00000553886 926 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC092325.1-201ENST00000566449 554 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.7□□□□□ -1.82
PMS2P54278 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS2P54278 SNORA59B-202ENST00000578183 701 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
PMS2P54278 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.7□□□□□ -1.82
PMS2P54278 AC245014.2-201ENST00000603689 287 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC246785.4-201ENST00000605374 287 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC092954.2-201ENST00000609103 430 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AC022306.2-201ENST00000617563 647 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AL356321.1-201ENST00000621360 228 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AL353748.2-201ENST00000622148 471 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AL357559.1-201ENST00000622228 274 ntBASIC3.7□□□□□ -1.82
PMS2P54278 AP000553.6-201ENST00000641242 118 ntBASIC3.7□□□□□ -1.82
PMS2P54278 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 ZNF285B-201ENST00000561698 1767 ntBASIC3.7□□□□□ -1.82
PMS2P54278 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 RNU6-173P-201ENST00000364215 104 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNY4P34-201ENST00000364779 95 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 SNORA5A-201ENST00000384111 134 ntBASIC3.69□□□□□ -1.82
PMS2P54278 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PMS2P54278 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PMS2P54278 U3.39-201ENST00000408569 239 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNU2-8P-201ENST00000410727 190 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL359704.1-201ENST00000411586 781 ntBASIC3.69□□□□□ -1.82
PMS2P54278 BX295541.1-201ENST00000417774 250 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC068533.1-201ENST00000418542 415 ntBASIC3.69□□□□□ -1.82
PMS2P54278 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.69□□□□□ -1.82
PMS2P54278 AC091286.1-201ENST00000431233 461 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL139415.2-201ENST00000431968 163 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL049734.2-201ENST00000441066 616 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC010655.1-201ENST00000449336 292 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC079448.1-201ENST00000449377 373 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC234775.1-201ENST00000454247 670 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL359385.1-201ENST00000456509 365 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RPS4XP2-201ENST00000458402 793 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 AC019235.1-201ENST00000503847 207 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.69□□□□□ -1.82
PMS2P54278 AC010265.1-201ENST00000513509 211 ntBASIC3.69□□□□□ -1.82
PMS2P54278 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.69□□□□□ -1.82
PMS2P54278 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 RNU2-27P-201ENST00000516185 142 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNU1-95P-201ENST00000516357 160 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNU1-128P-201ENST00000516704 160 ntBASIC3.69□□□□□ -1.82
PMS2P54278 RNU6-579P-201ENST00000516879 102 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.69□□□□□ -1.82
PMS2P54278 AC234778.2-201ENST00000566241 354 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.69□□□□□ -1.82
PMS2P54278 SRGNP1-201ENST00000603392 451 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL161756.2-201ENST00000604597 246 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC006077.1-201ENST00000604746 343 ntBASIC3.69□□□□□ -1.82
PMS2P54278 OR10AB1P-201ENST00000609613 938 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL355073.2-201ENST00000612106 557 ntBASIC3.69□□□□□ -1.82
PMS2P54278 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL359880.1-201ENST00000621879 266 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC068880.5-201ENST00000624331 290 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL157786.1-207ENST00000627771 695 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AC110994.2-201ENST00000635481 492 ntBASIC3.69□□□□□ -1.82
PMS2P54278 AL034408.1-202ENST00000636088 415 ntBASIC3.69□□□□□ -1.82
PMS2P54278 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PMS2P54278 ELF2P3-201ENST00000445099 1506 ntBASIC3.69□□□□□ -1.82
PMS2P54278 MTCO1P9-201ENST00000505577 1534 ntBASIC3.69□□□□□ -1.82
PMS2P54278 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
PMS2P54278 AC004520.1-201ENST00000608362 1413 ntBASIC3.69□□□□□ -1.82
PMS2P54278 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PMS2P54278 Y_RNA.88-201ENST00000363029 99 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms