Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RPL23AP84-201ENST00000571193 464 ntBASIC3.32□□□□□ -1.88
CLK1P49759 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.32□□□□□ -1.88
CLK1P49759 AC015871.2-201ENST00000603605 948 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC013476.2-201ENST00000614456 459 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC079597.1-201ENST00000624306 508 ntBASIC3.32□□□□□ -1.88
CLK1P49759 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.32□□□□□ -1.88
CLK1P49759 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 MTND4P16-201ENST00000466108 1367 ntBASIC3.32□□□□□ -1.88
CLK1P49759 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 AC027514.1-201ENST00000588561 1603 ntBASIC3.32□□□□□ -1.88
CLK1P49759 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CLK1P49759 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.32□□□□□ -1.88
CLK1P49759 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLK1P49759 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CLK1P49759 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 RNU6-462P-201ENST00000362659 105 ntBASIC3.31□□□□□ -1.88
CLK1P49759 Y_RNA.97-201ENST00000363094 102 ntBASIC3.31□□□□□ -1.88
CLK1P49759 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CLK1P49759 MIR887-201ENST00000401258 79 ntBASIC3.31□□□□□ -1.88
CLK1P49759 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 ZYG11AP1-201ENST00000430329 837 ntBASIC3.31□□□□□ -1.88
CLK1P49759 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.31□□□□□ -1.88
CLK1P49759 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
CLK1P49759 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
CLK1P49759 RNU7-23P-201ENST00000459465 62 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC087588.1-201ENST00000462203 316 ntBASIC3.31□□□□□ -1.88
CLK1P49759 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 AC109927.2-201ENST00000506416 303 ntBASIC3.31□□□□□ -1.88
CLK1P49759 SEM1P1-201ENST00000506694 209 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 TXNP6-201ENST00000510190 310 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
CLK1P49759 RANP9-201ENST00000519957 271 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC134698.4-201ENST00000523451 826 ntBASIC3.31□□□□□ -1.88
CLK1P49759 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CLK1P49759 AC124947.2-202ENST00000552735 133 ntBASIC3.31□□□□□ -1.88
CLK1P49759 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.31□□□□□ -1.88
CLK1P49759 AC091489.2-201ENST00000566263 604 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 AC083760.1-201ENST00000589621 670 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AP000403.1-201ENST00000603349 851 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AL137843.1-201ENST00000605078 385 ntBASIC3.31□□□□□ -1.88
CLK1P49759 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 RNU6-88P-201ENST00000606801 100 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC108747.1-201ENST00000609508 535 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC068944.2-201ENST00000610373 403 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC092794.1-201ENST00000612734 582 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC008498.1-201ENST00000613012 531 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC243773.3-201ENST00000613270 256 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AL450472.3-201ENST00000615578 367 ntBASIC3.31□□□□□ -1.88
CLK1P49759 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.31□□□□□ -1.88
CLK1P49759 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK1P49759 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.3□□□□□ -1.88
CLK1P49759 TEX21P-201ENST00000447107 1476 ntBASIC3.3□□□□□ -1.88
CLK1P49759 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 RNU6-28P-201ENST00000362378 107 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RNA5SP479-201ENST00000364858 117 ntBASIC3.3□□□□□ -1.88
CLK1P49759 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
CLK1P49759 MTCYBP36-201ENST00000404146 440 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RN7SKP202-201ENST00000410439 330 ntBASIC3.3□□□□□ -1.88
CLK1P49759 BX682237.1-201ENST00000415016 335 ntBASIC3.3□□□□□ -1.88
CLK1P49759 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLK1P49759 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK1P49759 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.3□□□□□ -1.88
CLK1P49759 AC104651.1-201ENST00000427559 735 ntBASIC3.3□□□□□ -1.88
CLK1P49759 NOTCH2P1-201ENST00000443481 624 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AC097493.1-201ENST00000463958 372 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AP000797.1-201ENST00000478870 387 ntBASIC3.3□□□□□ -1.88
CLK1P49759 RPS27P26-201ENST00000494583 239 ntBASIC3.3□□□□□ -1.88
CLK1P49759 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK1P49759 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
CLK1P49759 PAICSP4-201ENST00000517543 1253 ntBASIC3.3□□□□□ -1.88
CLK1P49759 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLK1P49759 AC007536.1-201ENST00000533382 349 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AC004024.1-201ENST00000549244 247 ntBASIC3.3□□□□□ -1.88
CLK1P49759 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.3□□□□□ -1.88
CLK1P49759 SETP2-201ENST00000553886 926 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms