Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PRIM1P49642 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRIM1P49642 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PRIM1P49642 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PRIM1P49642 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PRIM1P49642 RNU6-14P-201ENST00000384630 106 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 MT-TC-201ENST00000387405 66 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 MIR1250-201ENST00000408098 113 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 AC006946.1-201ENST00000429106 328 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 MTND3P9-201ENST00000429526 346 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 AC091286.1-201ENST00000431233 461 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.59□□□□□ -1.35
PRIM1P49642 RN7SL189P-201ENST00000468631 289 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.59□□□□□ -1.35
PRIM1P49642 AC107393.1-201ENST00000512403 346 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.59□□□□□ -1.35
PRIM1P49642 AP001880.2-201ENST00000538233 448 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 TOMM20P2-201ENST00000540082 421 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 SNORD91B-202ENST00000608459 222 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 AC010632.3-201ENST00000611377 369 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 SNORD39.4-201ENST00000620099 78 ntBASIC6.59□□□□□ -1.35
PRIM1P49642 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PRIM1P49642 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PRIM1P49642 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.59□□□□□ -1.36
PRIM1P49642 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.58□□□□□ -1.36
PRIM1P49642 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.58□□□□□ -1.36
PRIM1P49642 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
PRIM1P49642 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
PRIM1P49642 AC092376.2-201ENST00000622621 4116 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AL353621.1-201ENST00000418219 243 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.58□□□□□ -1.36
PRIM1P49642 RPL30P3-201ENST00000424262 333 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 HMGN2P27-201ENST00000427352 270 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 BX679664.1-201ENST00000434429 253 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC093414.1-201ENST00000434712 514 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 NDUFB4P8-201ENST00000435351 367 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 RPL26P6-201ENST00000440913 438 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.58□□□□□ -1.36
PRIM1P49642 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.58□□□□□ -1.36
PRIM1P49642 HMGN2P13-201ENST00000476476 274 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 MRPL42P6-201ENST00000486397 371 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 RPS15AP34-201ENST00000487776 387 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.58□□□□□ -1.36
PRIM1P49642 AC024405.2-202ENST00000532731 184 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.58□□□□□ -1.36
PRIM1P49642 MIR4660-201ENST00000583549 74 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC108738.1-201ENST00000603703 237 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC006077.1-201ENST00000604746 343 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 AC116447.1-201ENST00000613153 453 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 AC099654.2-201ENST00000433031 1980 ntBASIC6.58□□□□□ -1.36
PRIM1P49642 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PRIM1P49642 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PRIM1P49642 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PRIM1P49642 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PRIM1P49642 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.57□□□□□ -1.36
PRIM1P49642 Y_RNA.324-201ENST00000365165 102 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 RNU6-81P-201ENST00000365608 104 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 MIR589-201ENST00000385238 99 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 U3.42-201ENST00000408746 214 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 USP9YP7-201ENST00000436723 430 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.57□□□□□ -1.36
PRIM1P49642 AL354714.3-201ENST00000447284 493 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 PRDX3P3-201ENST00000447765 522 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 USP9YP32-201ENST00000452432 430 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 RN7SKP210-201ENST00000459176 261 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 RN7SL443P-201ENST00000464331 290 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.57□□□□□ -1.36
PRIM1P49642 MTND3P25-201ENST00000509243 135 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 RN7SKP276-201ENST00000516242 268 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 RNA5SP230-201ENST00000517039 122 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 OR4H12P-201ENST00000556269 907 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 AL590392.1-201ENST00000604960 446 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.57□□□□□ -1.36
PRIM1P49642 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.57□□□□□ -1.36
PRIM1P49642 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PRIM1P49642 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PRIM1P49642 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PRIM1P49642 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.57□□□□□ -1.36
PRIM1P49642 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PRIM1P49642 AP000756.2-201ENST00000624168 2567 ntBASIC6.57□□□□□ -1.36
PRIM1P49642 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms