Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC140076.1-201ENST00000449897 361 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 SNRPFP4-201ENST00000456366 242 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 SNORD42A-201ENST00000459584 64 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 RPS20P20-201ENST00000460498 340 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 MTND4LP3-201ENST00000468320 276 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC9A3P48764 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC9A3P48764 RAP1BP2-201ENST00000478270 544 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC9A3P48764 KCTD9P5-201ENST00000504141 1170 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 TTC39CP1-201ENST00000512513 755 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 Y_RNA.672-201ENST00000516289 104 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC022690.1-201ENST00000526681 550 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC137800.2-201ENST00000574375 120 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC013553.2-201ENST00000604244 589 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 MIR7851-201ENST00000610611 160 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC131902.3-201ENST00000611767 581 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AL390240.1-201ENST00000612950 384 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC010678.1-201ENST00000614118 713 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 uc_338.12-201ENST00000616344 181 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC108479.2-201ENST00000617314 601 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC103988.1-201ENST00000566382 2177 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC9A3P48764 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SLC9A3P48764 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SLC9A3P48764 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.15□□□□□ -1.9
SLC9A3P48764 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SLC9A3P48764 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SLC9A3P48764 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.15□□□□□ -1.9
SLC9A3P48764 GNG5P1-201ENST00000255500 204 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SLC9A3P48764 RNU5E-1-201ENST00000362477 120 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 RNA5SP515-201ENST00000364570 118 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 BTF3L4P1-201ENST00000413813 468 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 RPL21P40-201ENST00000428586 483 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC9A3P48764 MTND1P29-201ENST00000448112 647 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC093392.2-201ENST00000450682 337 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.15□□□□□ -1.91
SLC9A3P48764 snoU109.1-201ENST00000459339 135 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 LARP1BP2-201ENST00000486594 519 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 CDC42P4-201ENST00000510507 563 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 RNA5SP337-201ENST00000517007 109 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 NRON-201ENST00000517270 370 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC104027.1-201ENST00000521887 300 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 CASP1P1-201ENST00000526345 212 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AP000873.5-201ENST00000533906 236 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 ARL2BPP2-201ENST00000550907 489 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC103710.2-201ENST00000609912 942 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 SNHG22-203ENST00000617833 660 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 AC110994.2-201ENST00000635481 492 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SLC9A3P48764 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC9A3P48764 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC9A3P48764 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
SLC9A3P48764 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC9A3P48764 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC9A3P48764 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC9A3P48764 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC9A3P48764 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC9A3P48764 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC9A3P48764 Y_RNA.201-201ENST00000364052 96 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 Y_RNA.359-201ENST00000365498 102 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 SNORA75-201ENST00000384158 137 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 RNU6-348P-201ENST00000384386 107 ntBASIC3.14□□□□□ -1.91
SLC9A3P48764 RNU6-1197P-201ENST00000391183 107 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms