Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL12P48061 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL12P48061 HSPE1P3-201ENST00000559254 309 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AP001029.3-201ENST00000588063 596 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 MTND3P19-201ENST00000603825 345 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL160237.3-201ENST00000604114 1013 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 VIS1.1-201ENST00000610517 203 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC243773.3-201ENST00000613270 256 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 CRYM-AS1-204ENST00000637983 556 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL12P48061 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL12P48061 Y_RNA.238-201ENST00000364441 102 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 CD24P4-201ENST00000382840 243 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CXCL12P48061 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL12P48061 RPS3AP37-201ENST00000419176 745 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AC019178.2-201ENST00000423595 505 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AC233728.2-201ENST00000425348 757 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 Z98742.2-201ENST00000431564 187 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 SNRPEP4-201ENST00000435815 279 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CXCL12P48061 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL12P48061 Z96811.1-201ENST00000445880 108 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 RPL7P12-201ENST00000446719 750 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL12P48061 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.33□□□□□ -2.04
CXCL12P48061 AC090453.1-201ENST00000495560 436 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AC114322.1-201ENST00000506771 926 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 MTATP6P9-201ENST00000515039 680 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 RNU6-583P-201ENST00000516012 92 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 SNORA31.8-201ENST00000516327 108 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 MTCYBP20-201ENST00000524239 1129 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 OR5AK1P-201ENST00000524837 922 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.33□□□□□ -2.04
CXCL12P48061 SETP7-201ENST00000552169 453 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 DNAJC8P1-201ENST00000554535 372 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL12P48061 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.33□□□□□ -2.04
CXCL12P48061 AL157392.4-201ENST00000609756 345 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AL359198.2-201ENST00000611836 194 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AL110115.1-201ENST00000614396 364 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 AC025588.4-201ENST00000615802 908 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL12P48061 AL356585.4-201ENST00000623078 1229 ntBASIC2.33□□□□□ -2.04
CXCL12P48061 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.33□□□□□ -2.04
CXCL12P48061 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CXCL12P48061 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CXCL12P48061 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CXCL12P48061 SGO1P2-201ENST00000429458 1589 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RNU6-1155P-201ENST00000363554 107 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 SNORD21-201ENST00000383953 95 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RNU1-109P-201ENST00000383960 147 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RNU6-413P-201ENST00000384115 107 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RNU6-925P-201ENST00000384629 104 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AL136310.1-201ENST00000404926 654 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AL356320.2-201ENST00000417263 507 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL12P48061 EZH2P1-201ENST00000431167 291 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL12P48061 EEF1A1P39-201ENST00000440791 250 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 UBBP3-201ENST00000445497 241 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AL589880.1-201ENST00000448271 287 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.32□□□□□ -2.04
CXCL12P48061 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RPL18AP17-201ENST00000455326 198 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 SUMO2P2-201ENST00000456482 255 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL12P48061 AC119751.4-201ENST00000507498 357 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 CBX3P3-201ENST00000508108 532 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AC105914.1-201ENST00000511798 226 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 RN7SKP219-201ENST00000516825 296 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL12P48061 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL12P48061 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CXCL12P48061 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.32□□□□□ -2.04
CXCL12P48061 AC090695.1-201ENST00000561269 1222 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AC023813.2-201ENST00000564321 469 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 MIR4509-3-201ENST00000578671 94 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 MIR4509-2-201ENST00000583920 94 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL12P48061 AC021749.1-201ENST00000604322 607 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.32□□□□□ -2.04
CXCL12P48061 MIR4509-1-201ENST00000618224 94 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.32□□□□□ -2.04
CXCL12P48061 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CXCL12P48061 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL12P48061 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.31□□□□□ -2.04
CXCL12P48061 AL356292.1-201ENST00000283110 373 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 VTRNA1-1-201ENST00000363120 99 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 RNU6-560P-201ENST00000364007 108 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 SNORD116.1-201ENST00000365628 92 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 RNU6-1122P-201ENST00000384449 107 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 ERHP2-201ENST00000402323 299 ntBASIC2.31□□□□□ -2.04
CXCL12P48061 GSTA9P-201ENST00000406231 611 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms