Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
ATRXP46100 Y_RNA.453-201ENST00000384223 109 ntBASIC2.73□□□□□ -1.97
ATRXP46100 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.73□□□□□ -1.97
ATRXP46100 NEK4P1-201ENST00000433383 879 ntBASIC2.73□□□□□ -1.97
ATRXP46100 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.73□□□□□ -1.97
ATRXP46100 AP000936.3-201ENST00000438127 255 ntBASIC2.73□□□□□ -1.97
ATRXP46100 AC069439.1-201ENST00000494739 167 ntBASIC2.73□□□□□ -1.97
ATRXP46100 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.73□□□□□ -1.97
ATRXP46100 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.73□□□□□ -1.97
ATRXP46100 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.73□□□□□ -1.97
ATRXP46100 RNU1-143P-201ENST00000516296 146 ntBASIC2.73□□□□□ -1.97
ATRXP46100 DEFB108A-201ENST00000530110 222 ntBASIC2.73□□□□□ -1.97
ATRXP46100 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATRXP46100 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATRXP46100 MIR3913-1-201ENST00000577744 102 ntBASIC2.73□□□□□ -1.97
ATRXP46100 PRELID3BP8-201ENST00000604148 295 ntBASIC2.73□□□□□ -1.97
ATRXP46100 AF250324.2-201ENST00000608299 610 ntBASIC2.73□□□□□ -1.97
ATRXP46100 U1.23-201ENST00000610293 146 ntBASIC2.73□□□□□ -1.97
ATRXP46100 RNU1-68P-201ENST00000615382 146 ntBASIC2.73□□□□□ -1.97
ATRXP46100 AC005296.1-201ENST00000616145 209 ntBASIC2.73□□□□□ -1.97
ATRXP46100 U1.39-201ENST00000621562 146 ntBASIC2.73□□□□□ -1.97
ATRXP46100 OR4G11P-202ENST00000642116 1414 ntBASIC2.72□□□□□ -1.97
ATRXP46100 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATRXP46100 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.72□□□□□ -1.97
ATRXP46100 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ATRXP46100 PHKBP1-201ENST00000450951 1951 ntBASIC2.72□□□□□ -1.97
ATRXP46100 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATRXP46100 Y_RNA.159-201ENST00000363674 87 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
ATRXP46100 AL359704.1-201ENST00000411586 781 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.72□□□□□ -1.97
ATRXP46100 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.72□□□□□ -1.97
ATRXP46100 RPS15AP12-201ENST00000419498 388 ntBASIC2.72□□□□□ -1.97
ATRXP46100 DUTP6-201ENST00000425573 462 ntBASIC2.72□□□□□ -1.97
ATRXP46100 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATRXP46100 RAB11AP1-201ENST00000442978 646 ntBASIC2.72□□□□□ -1.97
ATRXP46100 RPL36AP33-201ENST00000450395 310 ntBASIC2.72□□□□□ -1.97
ATRXP46100 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.72□□□□□ -1.97
ATRXP46100 AC012123.2-201ENST00000485809 248 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC105417.1-201ENST00000514691 285 ntBASIC2.72□□□□□ -1.97
ATRXP46100 HSPA8P13-201ENST00000523715 472 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC092470.1-201ENST00000546187 132 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC245505.1-201ENST00000556398 224 ntBASIC2.72□□□□□ -1.97
ATRXP46100 PCMTD1P2-201ENST00000565017 355 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AL391840.1-201ENST00000571144 367 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC002984.1-201ENST00000591692 448 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC090578.1-201ENST00000604955 591 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC108479.2-201ENST00000617314 601 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AC074140.1-201ENST00000621617 208 ntBASIC2.72□□□□□ -1.97
ATRXP46100 AL008636.1-201ENST00000625038 1018 ntBASIC2.72□□□□□ -1.97
ATRXP46100 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ATRXP46100 MTCO1P14-201ENST00000441695 1559 ntBASIC2.72□□□□□ -1.97
ATRXP46100 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.72□□□□□ -1.97
ATRXP46100 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.72□□□□□ -1.97
ATRXP46100 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.72□□□□□ -1.97
ATRXP46100 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
ATRXP46100 SNORA62.2-201ENST00000364672 152 ntBASIC2.71□□□□□ -1.97
ATRXP46100 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.71□□□□□ -1.97
ATRXP46100 MIR16-1-201ENST00000385271 89 ntBASIC2.71□□□□□ -1.97
ATRXP46100 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.71□□□□□ -1.97
ATRXP46100 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.71□□□□□ -1.97
ATRXP46100 MTCYBP1-201ENST00000454315 1119 ntBASIC2.71□□□□□ -1.97
ATRXP46100 RPL9P33-201ENST00000484311 566 ntBASIC2.71□□□□□ -1.97
ATRXP46100 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.71□□□□□ -1.97
ATRXP46100 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.71□□□□□ -1.97
ATRXP46100 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.71□□□□□ -1.97
ATRXP46100 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.71□□□□□ -1.97
ATRXP46100 AC009063.1-201ENST00000563342 702 ntBASIC2.71□□□□□ -1.97
ATRXP46100 NRBF2P1-201ENST00000587407 859 ntBASIC2.71□□□□□ -1.97
ATRXP46100 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.71□□□□□ -1.97
ATRXP46100 PLCE1P1-201ENST00000622094 305 ntBASIC2.71□□□□□ -1.97
ATRXP46100 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.71□□□□□ -1.97
ATRXP46100 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATRXP46100 AP006437.1-201ENST00000641440 3685 ntBASIC2.71□□□□□ -1.98
ATRXP46100 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.71□□□□□ -1.98
ATRXP46100 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATRXP46100 SNRPEP3-201ENST00000338402 276 ntBASIC2.71□□□□□ -1.98
ATRXP46100 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
ATRXP46100 RNU5E-5P-201ENST00000365379 116 ntBASIC2.71□□□□□ -1.98
ATRXP46100 RPS3AP36-201ENST00000398190 775 ntBASIC2.71□□□□□ -1.98
ATRXP46100 RNU6-575P-201ENST00000411326 105 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.71□□□□□ -1.98
ATRXP46100 DPH3P2-201ENST00000422618 250 ntBASIC2.71□□□□□ -1.98
ATRXP46100 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ATRXP46100 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.71□□□□□ -1.98
ATRXP46100 AC241584.1-201ENST00000438469 1241 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
ATRXP46100 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.71□□□□□ -1.98
ATRXP46100 TRBV26-201ENST00000456572 344 ntBASIC2.71□□□□□ -1.98
ATRXP46100 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.71□□□□□ -1.98
ATRXP46100 snoU13.7-201ENST00000459220 104 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AC005921.1-201ENST00000510589 286 ntBASIC2.71□□□□□ -1.98
ATRXP46100 RNU4-49P-201ENST00000516080 140 ntBASIC2.71□□□□□ -1.98
ATRXP46100 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
ATRXP46100 SNORA31.21-201ENST00000517180 77 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AC107934.1-201ENST00000522215 217 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.71□□□□□ -1.98
ATRXP46100 AP003181.2-201ENST00000528941 181 ntBASIC2.71□□□□□ -1.98
ATRXP46100 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ATRXP46100 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms