Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 AC018529.3-201ENST00000624212 2254 ntBASIC4.72□□□□□ -1.65
CCNFP41002 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCNFP41002 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCNFP41002 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.72□□□□□ -1.65
CCNFP41002 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCNFP41002 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCNFP41002 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CCNFP41002 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.65
CCNFP41002 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.71□□□□□ -1.65
CCNFP41002 AC004925.1-201ENST00000624256 2706 ntBASIC4.71□□□□□ -1.66
CCNFP41002 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 Y_RNA.148-201ENST00000363557 117 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RNU6-1279P-201ENST00000383917 103 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RNU6-76P-201ENST00000384060 104 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RNU6-306P-201ENST00000384617 107 ntBASIC4.71□□□□□ -1.66
CCNFP41002 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 AL590704.1-201ENST00000402856 794 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNFP41002 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNFP41002 MTCYBP10-201ENST00000424905 650 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RPL7P37-201ENST00000425095 738 ntBASIC4.71□□□□□ -1.66
CCNFP41002 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNFP41002 PSMD10P3-201ENST00000437000 448 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AL035666.1-201ENST00000446195 348 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RPS5P7-201ENST00000456664 608 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AC093270.2-201ENST00000486157 792 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AC097473.1-201ENST00000508142 408 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNFP41002 Y_RNA.708-201ENST00000516950 96 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RN7SKP258-201ENST00000517151 304 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AP004371.1-201ENST00000525240 214 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNFP41002 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNFP41002 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNFP41002 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNFP41002 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.71□□□□□ -1.66
CCNFP41002 MIR5699-201ENST00000578903 90 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AC007938.3-201ENST00000604965 623 ntBASIC4.71□□□□□ -1.66
CCNFP41002 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 AC011890.2-201ENST00000613393 294 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AL132822.1-201ENST00000617063 513 ntBASIC4.71□□□□□ -1.66
CCNFP41002 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
CCNFP41002 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNFP41002 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.71□□□□□ -1.66
CCNFP41002 AL353748.2-201ENST00000622148 471 ntBASIC4.71□□□□□ -1.66
CCNFP41002 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.71□□□□□ -1.66
CCNFP41002 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 AC087190.4-201ENST00000574616 8334 ntBASIC4.71□□□□□ -1.66
CCNFP41002 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCNFP41002 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.71□□□□□ -1.66
CCNFP41002 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CCNFP41002 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCNFP41002 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNFP41002 SDAD1P1-202ENST00000524156 2051 ntBASIC4.7□□□□□ -1.66
CCNFP41002 PRO1804-201ENST00000623780 2050 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU6-463P-201ENST00000384340 107 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU6-45P-201ENST00000384471 107 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU6-1105P-201ENST00000384774 107 ntBASIC4.7□□□□□ -1.66
CCNFP41002 U3.30-201ENST00000391308 210 ntBASIC4.7□□□□□ -1.66
CCNFP41002 HDGFP1-201ENST00000405943 252 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU6-1050P-201ENST00000410388 107 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RPS12P24-201ENST00000412619 387 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC080125.1-201ENST00000414888 684 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.7□□□□□ -1.66
CCNFP41002 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 AL772161.1-201ENST00000439130 476 ntBASIC4.7□□□□□ -1.66
CCNFP41002 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNFP41002 H2AFZP6-201ENST00000444403 394 ntBASIC4.7□□□□□ -1.66
CCNFP41002 OR1H1P-201ENST00000448731 937 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.7□□□□□ -1.66
CCNFP41002 RPL23AP65-201ENST00000475608 468 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RN7SL826P-201ENST00000479724 288 ntBASIC4.7□□□□□ -1.66
CCNFP41002 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNFP41002 VN1R104P-201ENST00000505115 1009 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC104136.1-201ENST00000512969 394 ntBASIC4.7□□□□□ -1.66
CCNFP41002 RNU1-6P-201ENST00000516290 144 ntBASIC4.7□□□□□ -1.66
CCNFP41002 SNORA31.22-201ENST00000517204 135 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC009902.1-201ENST00000519351 183 ntBASIC4.7□□□□□ -1.66
CCNFP41002 ERHP1-201ENST00000523006 310 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNFP41002 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.7□□□□□ -1.66
CCNFP41002 RPL23AP87-202ENST00000573039 466 ntBASIC4.7□□□□□ -1.66
CCNFP41002 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 MIR15A-201ENST00000607334 83 ntBASIC4.7□□□□□ -1.66
CCNFP41002 AC015967.1-201ENST00000619893 476 ntBASIC4.7□□□□□ -1.66
CCNFP41002 7SK.10-201ENST00000621414 298 ntBASIC4.7□□□□□ -1.66
CCNFP41002 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms