Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXA9P31269 PTENP1-201ENST00000447117 1215 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 MTCYBP11-201ENST00000447254 1109 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXA9P31269 RPL39P6-201ENST00000448289 150 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXA9P31269 RPL18AP17-201ENST00000455326 198 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC092798.1-201ENST00000458542 409 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXA9P31269 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 MTCYBP17-201ENST00000503579 789 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC020699.1-201ENST00000505161 445 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.61□□□□□ -1.99
HOXA9P31269 RNY4P37-201ENST00000516225 96 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA9P31269 OR7K1P-201ENST00000546439 926 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC126177.3-201ENST00000551839 688 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXA9P31269 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA9P31269 MIR5092-201ENST00000583139 88 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXA9P31269 CYP3A51P-201ENST00000633513 256 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 NUP58P1-201ENST00000502546 1738 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.61□□□□□ -1.99
HOXA9P31269 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXA9P31269 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXA9P31269 MIR513B-201ENST00000385136 84 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 ELOCP9-201ENST00000418624 239 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC099677.1-201ENST00000420575 175 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC084290.1-201ENST00000434995 374 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 COX7BP2-201ENST00000437976 242 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC092427.1-201ENST00000439177 601 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 MTND2P20-201ENST00000440805 661 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC104389.3-201ENST00000445629 235 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXA9P31269 USP9YP34-201ENST00000453983 808 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 RPL23AP45-201ENST00000476406 468 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXA9P31269 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.6□□□□□ -1.99
HOXA9P31269 AC021146.8-201ENST00000507455 733 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 MTCO1P47-201ENST00000523889 1271 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXA9P31269 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.6□□□□□ -1.99
HOXA9P31269 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXA9P31269 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.6□□□□□ -1.99
HOXA9P31269 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXA9P31269 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXA9P31269 RPL23AP84-201ENST00000571193 464 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXA9P31269 AC103810.6-201ENST00000606708 136 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXA9P31269 AC092106.3-201ENST00000611308 722 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC006329.2-201ENST00000611491 394 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC023510.2-201ENST00000622162 746 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC040168.1-201ENST00000623594 991 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 AC079228.1-201ENST00000624774 1049 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 GDI2P1-201ENST00000429312 1336 ntBASIC2.6□□□□□ -1.99
HOXA9P31269 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HOXA9P31269 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXA9P31269 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HOXA9P31269 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXA9P31269 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXA9P31269 RNA5SP432-201ENST00000362480 116 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 Y_RNA.465-201ENST00000384293 102 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 MIR493-201ENST00000385254 89 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 RNU6-712P-201ENST00000410558 100 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AL096701.2-201ENST00000416920 238 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 RPL7P30-201ENST00000420888 709 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXA9P31269 FGF7P5-201ENST00000441829 291 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXA9P31269 HIGD1AP2-201ENST00000446367 280 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 MTCO2P25-201ENST00000447065 681 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 ST13P20-201ENST00000447996 1065 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 SNRPGP6-201ENST00000451124 220 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 RPL21P134-201ENST00000453468 483 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 CACYBPP2-201ENST00000453625 678 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXA9P31269 snoU13.15-201ENST00000459407 104 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 snoU13.26-201ENST00000459452 105 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 RPS27AP9-201ENST00000477681 438 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 TMEM251P1-201ENST00000503717 318 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXA9P31269 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXA9P31269 AC079395.1-201ENST00000510981 262 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 AC116353.3-201ENST00000511215 249 ntBASIC2.59□□□□□ -1.99
HOXA9P31269 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms