Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.46□□□□□ -1.86
ABCD3P28288 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.46□□□□□ -1.86
ABCD3P28288 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.46□□□□□ -1.86
ABCD3P28288 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.46□□□□□ -1.86
ABCD3P28288 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.46□□□□□ -1.86
ABCD3P28288 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
ABCD3P28288 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.46□□□□□ -1.86
ABCD3P28288 GLUD1P4-201ENST00000590914 418 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 AC174048.1-201ENST00000603389 144 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 AC104763.2-201ENST00000604179 382 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 MIR98-201ENST00000606724 119 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 AL589743.7-201ENST00000612637 233 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 AL589994.2-201ENST00000621124 579 ntBASIC3.46□□□□□ -1.86
ABCD3P28288 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ABCD3P28288 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ABCD3P28288 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
ABCD3P28288 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ABCD3P28288 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 Y_RNA.359-201ENST00000365498 102 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.45□□□□□ -1.86
ABCD3P28288 RNU6-1035P-201ENST00000384477 107 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 U8.11-201ENST00000384699 133 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 U8.12-201ENST00000384701 133 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 MIR558-201ENST00000384920 94 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 RNA5SP424-201ENST00000390988 115 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 DEFB108C-201ENST00000400154 252 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 SNORA11-201ENST00000408789 128 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.45□□□□□ -1.86
ABCD3P28288 ZNF863P-201ENST00000426746 417 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC104651.1-201ENST00000427559 735 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AL445584.1-201ENST00000431451 330 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 NOTCH2P1-201ENST00000443481 624 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 MTCO2P7-201ENST00000446518 666 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
ABCD3P28288 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.45□□□□□ -1.86
ABCD3P28288 BTF3L4P4-201ENST00000506381 449 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 PCBP2P3-201ENST00000509726 843 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.45□□□□□ -1.86
ABCD3P28288 RNU6-430P-201ENST00000517078 107 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 RNU6-711P-201ENST00000517255 106 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 HMGB1P41-201ENST00000520234 440 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.45□□□□□ -1.86
ABCD3P28288 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.45□□□□□ -1.86
ABCD3P28288 AC006960.3-201ENST00000561845 705 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.45□□□□□ -1.86
ABCD3P28288 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.45□□□□□ -1.86
ABCD3P28288 MIR3913-1-201ENST00000577744 102 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC073648.5-201ENST00000603502 305 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 AC008498.1-201ENST00000613012 531 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 MIR8058-201ENST00000615737 89 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 AC091905.1-201ENST00000624400 311 ntBASIC3.45□□□□□ -1.86
ABCD3P28288 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
ABCD3P28288 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
ABCD3P28288 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ABCD3P28288 AC005183.1-201ENST00000603687 1979 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC233263.6-201ENST00000631132 1963 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
ABCD3P28288 RNU1-18P-201ENST00000363062 164 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNU6-623P-201ENST00000363143 105 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 Y_RNA.194-201ENST00000363985 102 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 Y_RNA.245-201ENST00000364493 95 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 SMIM11P1-201ENST00000369586 178 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNU6-217P-201ENST00000384164 104 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 MIR554-201ENST00000384874 96 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 MIR134-201ENST00000385258 73 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RNU6ATAC-201ENST00000408749 126 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RPL30P2-201ENST00000414021 291 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC009237.5-201ENST00000414271 501 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 BX295541.1-201ENST00000417774 250 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC016907.1-201ENST00000419483 435 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC133104.1-201ENST00000429100 218 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 RPL31P35-201ENST00000431058 377 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC007389.2-201ENST00000434630 306 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AC122718.1-201ENST00000439448 744 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.44□□□□□ -1.86
ABCD3P28288 HMGB3P11-201ENST00000440127 604 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
ABCD3P28288 AC079781.2-201ENST00000446424 169 ntBASIC3.44□□□□□ -1.86
ABCD3P28288 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.44□□□□□ -1.86
ABCD3P28288 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms