Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL590365.1-201ENST00000450788 243 ntBASIC3.22□□□□□ -1.89
CDH3P22223 MTND1P9-201ENST00000453775 944 ntBASIC3.22□□□□□ -1.89
CDH3P22223 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH3P22223 AC055855.1-201ENST00000489563 579 ntBASIC3.22□□□□□ -1.89
CDH3P22223 KLHL2P1-201ENST00000508691 521 ntBASIC3.22□□□□□ -1.89
CDH3P22223 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AC103783.1-201ENST00000520506 373 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 SETP2-201ENST00000553886 926 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
CDH3P22223 NBR2-204ENST00000587322 63 ntBASIC3.22□□□□□ -1.89
CDH3P22223 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH3P22223 AC068276.1-201ENST00000605793 379 ntBASIC3.22□□□□□ -1.89
CDH3P22223 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH3P22223 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH3P22223 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH3P22223 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH3P22223 AL390237.1-201ENST00000404226 1415 ntBASIC3.21□□□□□ -1.9
CDH3P22223 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDH3P22223 MTCO1P9-201ENST00000505577 1534 ntBASIC3.21□□□□□ -1.9
CDH3P22223 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH3P22223 FGF7P2-201ENST00000332473 296 ntBASIC3.21□□□□□ -1.9
CDH3P22223 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH3P22223 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 Y_RNA.51-201ENST00000362725 102 ntBASIC3.21□□□□□ -1.9
CDH3P22223 RNY3P10-201ENST00000384764 102 ntBASIC3.21□□□□□ -1.9
CDH3P22223 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
CDH3P22223 RNA5SP38-201ENST00000410750 119 ntBASIC3.21□□□□□ -1.9
CDH3P22223 USP9YP13-201ENST00000417797 480 ntBASIC3.21□□□□□ -1.9
CDH3P22223 ATG3P1-201ENST00000419507 911 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH3P22223 AL049734.2-201ENST00000441066 616 ntBASIC3.21□□□□□ -1.9
CDH3P22223 TPT1P14-201ENST00000448018 505 ntBASIC3.21□□□□□ -1.9
CDH3P22223 MTND1P29-201ENST00000448112 647 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
CDH3P22223 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 AC110794.1-201ENST00000505816 425 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC026427.2-201ENST00000506228 536 ntBASIC3.21□□□□□ -1.9
CDH3P22223 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH3P22223 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH3P22223 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH3P22223 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH3P22223 DNAJC8P1-201ENST00000554535 372 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 AC073544.2-201ENST00000601155 540 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 AL391813.2-201ENST00000609113 322 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC138749.5-201ENST00000611461 208 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AL450472.3-201ENST00000615578 367 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC116165.2-201ENST00000616705 206 ntBASIC3.21□□□□□ -1.9
CDH3P22223 MIR6076-201ENST00000617521 113 ntBASIC3.21□□□□□ -1.9
CDH3P22223 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC092140.2-201ENST00000618027 521 ntBASIC3.21□□□□□ -1.9
CDH3P22223 MIR6130-201ENST00000619419 109 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AL356321.1-201ENST00000621360 228 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC110801.1-201ENST00000623590 212 ntBASIC3.21□□□□□ -1.9
CDH3P22223 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
CDH3P22223 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDH3P22223 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDH3P22223 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDH3P22223 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CDH3P22223 AL356274.2-201ENST00000624379 3752 ntBASIC3.21□□□□□ -1.9
CDH3P22223 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CDH3P22223 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
CDH3P22223 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH3P22223 TAB3P1-202ENST00000452645 1634 ntBASIC3.2□□□□□ -1.9
CDH3P22223 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH3P22223 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDH3P22223 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDH3P22223 RNU4-91P-201ENST00000364778 135 ntBASIC3.2□□□□□ -1.9
CDH3P22223 MIR491-201ENST00000384877 84 ntBASIC3.2□□□□□ -1.9
CDH3P22223 SNORD115.1-201ENST00000391109 76 ntBASIC3.2□□□□□ -1.9
CDH3P22223 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
CDH3P22223 Y_RNA.608-201ENST00000410647 95 ntBASIC3.2□□□□□ -1.9
CDH3P22223 HMGN1P24-201ENST00000412282 298 ntBASIC3.2□□□□□ -1.9
CDH3P22223 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
CDH3P22223 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.2□□□□□ -1.9
CDH3P22223 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH3P22223 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH3P22223 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH3P22223 AC093151.1-201ENST00000427711 313 ntBASIC3.2□□□□□ -1.9
CDH3P22223 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH3P22223 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH3P22223 GAPDHP27-201ENST00000447427 1020 ntBASIC3.2□□□□□ -1.9
CDH3P22223 USP9YP12-201ENST00000450481 570 ntBASIC3.2□□□□□ -1.9
CDH3P22223 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDH3P22223 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.2□□□□□ -1.9
CDH3P22223 RNA5SP269-201ENST00000459032 137 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms