Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.66□□□□□ -1.82
CD53P19397 MIR548AB-201ENST00000584917 84 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC020895.1-201ENST00000595362 272 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.66□□□□□ -1.82
CD53P19397 AC080078.2-201ENST00000603766 501 ntBASIC3.66□□□□□ -1.82
CD53P19397 AL359999.1-201ENST00000604513 294 ntBASIC3.66□□□□□ -1.82
CD53P19397 AL354984.3-201ENST00000604803 325 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC004492.1-201ENST00000607036 742 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC107294.1-201ENST00000609524 467 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC005332.10-201ENST00000612725 619 ntBASIC3.66□□□□□ -1.82
CD53P19397 AC025594.3-201ENST00000613068 790 ntBASIC3.66□□□□□ -1.82
CD53P19397 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 uc_338.12-201ENST00000616344 181 ntBASIC3.66□□□□□ -1.82
CD53P19397 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.66□□□□□ -1.82
CD53P19397 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
CD53P19397 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CD53P19397 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CD53P19397 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CD53P19397 SRP72P2-201ENST00000344851 1979 ntBASIC3.65□□□□□ -1.82
CD53P19397 MTND4P4-201ENST00000439033 1366 ntBASIC3.65□□□□□ -1.82
CD53P19397 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.65□□□□□ -1.82
CD53P19397 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
CD53P19397 RNU5F-6P-201ENST00000362979 116 ntBASIC3.65□□□□□ -1.83
CD53P19397 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
CD53P19397 RNY3P13-201ENST00000365542 102 ntBASIC3.65□□□□□ -1.83
CD53P19397 SNORD21-201ENST00000383953 95 ntBASIC3.65□□□□□ -1.83
CD53P19397 RNU6-533P-201ENST00000384144 107 ntBASIC3.65□□□□□ -1.83
CD53P19397 NDUFS5P1-201ENST00000405668 289 ntBASIC3.65□□□□□ -1.83
CD53P19397 ZNF90P2-204ENST00000419323 1075 ntBASIC3.65□□□□□ -1.83
CD53P19397 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.65□□□□□ -1.83
CD53P19397 ELOCP14-201ENST00000428070 331 ntBASIC3.65□□□□□ -1.83
CD53P19397 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.65□□□□□ -1.83
CD53P19397 KCTD9P3-201ENST00000434597 1169 ntBASIC3.65□□□□□ -1.83
CD53P19397 ELOCP7-201ENST00000439968 331 ntBASIC3.65□□□□□ -1.83
CD53P19397 ST13P20-201ENST00000447996 1065 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
CD53P19397 MTND1P27-201ENST00000451117 902 ntBASIC3.65□□□□□ -1.83
CD53P19397 MTCO3P20-201ENST00000454926 688 ntBASIC3.65□□□□□ -1.83
CD53P19397 SNORD97-201ENST00000459187 142 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC009901.1-201ENST00000506703 541 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC079140.3-201ENST00000511111 550 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL117351.2-201ENST00000513571 157 ntBASIC3.65□□□□□ -1.83
CD53P19397 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.65□□□□□ -1.83
CD53P19397 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.65□□□□□ -1.83
CD53P19397 RANP9-201ENST00000519957 271 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC022616.6-201ENST00000520479 119 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.65□□□□□ -1.83
CD53P19397 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.65□□□□□ -1.83
CD53P19397 AC123904.2-201ENST00000548059 300 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.65□□□□□ -1.83
CD53P19397 AC010653.1-201ENST00000571108 881 ntBASIC3.65□□□□□ -1.83
CD53P19397 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 AL670379.6-201ENST00000603753 252 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.11-201ENST00000604059 253 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC008162.1-201ENST00000604718 254 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.1-201ENST00000604752 252 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.5-201ENST00000605253 252 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.12-201ENST00000605291 253 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.8-201ENST00000605353 252 ntBASIC3.65□□□□□ -1.83
CD53P19397 AL670379.7-201ENST00000605823 252 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC087752.4-201ENST00000605911 462 ntBASIC3.65□□□□□ -1.83
CD53P19397 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.65□□□□□ -1.83
CD53P19397 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.65□□□□□ -1.83
CD53P19397 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.65□□□□□ -1.83
CD53P19397 UCA1.1-201ENST00000620952 75 ntBASIC3.65□□□□□ -1.83
CD53P19397 AC090617.7-201ENST00000623952 126 ntBASIC3.65□□□□□ -1.83
CD53P19397 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
CD53P19397 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 AL359693.1-201ENST00000614959 2407 ntBASIC3.65□□□□□ -1.83
CD53P19397 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CD53P19397 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.65□□□□□ -1.83
CD53P19397 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CD53P19397 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.64□□□□□ -1.83
CD53P19397 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CD53P19397 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CD53P19397 RNU6-884P-201ENST00000363889 107 ntBASIC3.64□□□□□ -1.83
CD53P19397 MIR200C-201ENST00000384980 68 ntBASIC3.64□□□□□ -1.83
CD53P19397 RPL17P50-201ENST00000396131 546 ntBASIC3.64□□□□□ -1.83
CD53P19397 DEFB108C-201ENST00000400154 252 ntBASIC3.64□□□□□ -1.83
CD53P19397 AC104651.1-201ENST00000427559 735 ntBASIC3.64□□□□□ -1.83
CD53P19397 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.64□□□□□ -1.83
CD53P19397 AC093156.1-201ENST00000440382 670 ntBASIC3.64□□□□□ -1.83
CD53P19397 CYCSP32-201ENST00000440548 321 ntBASIC3.64□□□□□ -1.83
CD53P19397 RPS4XP4-201ENST00000443195 763 ntBASIC3.64□□□□□ -1.83
CD53P19397 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.64□□□□□ -1.83
CD53P19397 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.64□□□□□ -1.83
CD53P19397 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.64□□□□□ -1.83
CD53P19397 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.64□□□□□ -1.83
CD53P19397 MRPS17P3-201ENST00000465453 385 ntBASIC3.64□□□□□ -1.83
CD53P19397 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.64□□□□□ -1.83
CD53P19397 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CD53P19397 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms