Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL136133.1-201ENST00000413694 376 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 LUZP4P1-201ENST00000415420 344 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 MRPL50P2-201ENST00000416821 482 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 UBE2D3P2-201ENST00000424409 445 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC112220.1-201ENST00000434628 355 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 AP000936.2-201ENST00000447151 681 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 MTCO1P48-201ENST00000448024 1096 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 RN7SL432P-201ENST00000484057 298 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC096725.1-201ENST00000514266 313 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC105185.1-201ENST00000518705 535 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 OR4P1P-201ENST00000530808 1136 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXC4P09017 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXC4P09017 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AP001981.2-201ENST00000603241 418 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC009220.3-201ENST00000604318 586 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC105129.3-201ENST00000605455 485 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXC4P09017 AC026634.1-201ENST00000634369 198 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXC4P09017 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXC4P09017 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HOXC4P09017 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.68□□□□□ -1.98
HOXC4P09017 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
HOXC4P09017 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC4P09017 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 Y_RNA.51-201ENST00000362725 102 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 AL133264.1-201ENST00000407157 562 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 ZNF885P-201ENST00000420174 1098 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC4P09017 MTATP6P4-201ENST00000427725 675 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXC4P09017 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 MTND4LP10-201ENST00000435146 291 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 MTCO2P16-201ENST00000436962 677 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 TAF9P1-201ENST00000445421 515 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 TAF9P2-201ENST00000454958 515 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 RAP1BP2-201ENST00000478270 544 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 XKRY-201ENST00000510392 1100 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXC4P09017 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 RNU6-27P-201ENST00000516146 107 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 SNORA31.21-201ENST00000517180 77 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC008127.2-201ENST00000549925 1075 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXC4P09017 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 FAM60BP-201ENST00000578364 658 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 AC018714.1-201ENST00000605028 208 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 RPL23AP88-201ENST00000605759 454 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC135507.1-201ENST00000607214 561 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXC4P09017 AF246928.1-201ENST00000623768 87 ntBASIC2.67□□□□□ -1.98
HOXC4P09017 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
HOXC4P09017 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXC4P09017 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC4P09017 AC087359.1-201ENST00000508335 1740 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RPL9P7-201ENST00000330965 580 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RNU6-931P-201ENST00000363850 107 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 MIR34A-201ENST00000385130 110 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RPS4XP8-201ENST00000402039 771 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RNU2-52P-201ENST00000410680 190 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 PIGPP2-201ENST00000411569 458 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
HOXC4P09017 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXC4P09017 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms