Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RANP9-201ENST00000519957 271 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.28□□□□□ -1.72
CNOT4O95628 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.28□□□□□ -1.72
CNOT4O95628 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.28□□□□□ -1.72
CNOT4O95628 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.28□□□□□ -1.72
CNOT4O95628 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.28□□□□□ -1.72
CNOT4O95628 AC074050.1-201ENST00000563247 211 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC005014.2-201ENST00000607795 599 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC015914.2-201ENST00000618167 288 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 AC098657.3-201ENST00000620434 263 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
CNOT4O95628 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNOT4O95628 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNOT4O95628 TPTE2P4-201ENST00000258589 1605 ntBASIC4.28□□□□□ -1.72
CNOT4O95628 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.28□□□□□ -1.72
CNOT4O95628 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CNOT4O95628 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.73
CNOT4O95628 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CNOT4O95628 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CNOT4O95628 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CNOT4O95628 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.27□□□□□ -1.73
CNOT4O95628 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
CNOT4O95628 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 API5P2-201ENST00000397055 1498 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-1115P-201ENST00000362490 106 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 Y_RNA.149-201ENST00000363558 117 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 Y_RNA.193-201ENST00000363979 102 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 SNORA70.2-201ENST00000364506 135 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-1040P-201ENST00000383974 107 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-1032P-201ENST00000384100 107 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-310P-201ENST00000384655 107 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CNOT4O95628 AL360182.1-201ENST00000397433 468 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 MRPL42P3-201ENST00000401492 326 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RN7SKP16-201ENST00000410180 299 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNA5SP107-201ENST00000411358 122 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 MCFD2P1-201ENST00000417812 300 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.27□□□□□ -1.73
CNOT4O95628 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.27□□□□□ -1.73
CNOT4O95628 RAC1P6-201ENST00000423911 575 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.27□□□□□ -1.73
CNOT4O95628 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC005094.1-201ENST00000440420 368 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.27□□□□□ -1.73
CNOT4O95628 snoU13.1-201ENST00000459157 104 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 SNORD97-201ENST00000459187 142 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RPS4XP13-201ENST00000483219 789 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-189P-201ENST00000516120 101 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNU6-1095P-201ENST00000516148 108 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.27□□□□□ -1.73
CNOT4O95628 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC008269.2-201ENST00000561915 1105 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 ATP5J2P6-201ENST00000565203 266 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 AC022726.1-201ENST00000587475 207 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.27□□□□□ -1.73
CNOT4O95628 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.27□□□□□ -1.73
CNOT4O95628 AC012443.1-201ENST00000605605 231 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 AC103705.1-201ENST00000619013 241 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.27□□□□□ -1.73
CNOT4O95628 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 EXOC5P1-201ENST00000510543 1969 ntBASIC4.27□□□□□ -1.73
CNOT4O95628 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNOT4O95628 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CNOT4O95628 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNOT4O95628 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNOT4O95628 Y_RNA.5-201ENST00000362334 102 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RNU6-960P-201ENST00000364056 120 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 SNORD116-11-201ENST00000383882 92 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 MIR298-201ENST00000401212 88 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AL357515.1-201ENST00000402967 542 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 MIR1302-3-201ENST00000408128 138 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 Y_RNA.618-201ENST00000410949 107 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 Y_RNA.646-201ENST00000410980 101 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RN7SKP58-201ENST00000411010 305 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 RNU6-387P-201ENST00000411331 105 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
CNOT4O95628 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.26□□□□□ -1.73
CNOT4O95628 AC018865.2-201ENST00000423631 129 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.26□□□□□ -1.73
CNOT4O95628 RPS17P8-201ENST00000434525 335 ntBASIC4.26□□□□□ -1.73
CNOT4O95628 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.26□□□□□ -1.73
CNOT4O95628 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms