Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 NRBF2P3-201ENST00000432731 865 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.2□□□□□ -1.58
PRPF40AO75400 SCARNA10-201ENST00000459255 330 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 RPL37P6-201ENST00000460682 294 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AC096576.1-201ENST00000489014 359 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 RPL36AP41-201ENST00000493820 306 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 OR51K1P-201ENST00000510214 950 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 SNORA31.3-201ENST00000516029 96 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 SNORA14.1-201ENST00000516113 141 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 MIR4270-201ENST00000581799 70 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PRPF40AO75400 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.2□□□□□ -1.58
PRPF40AO75400 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PRPF40AO75400 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40AO75400 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.2□□□□□ -1.58
PRPF40AO75400 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40AO75400 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40AO75400 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40AO75400 HSPA8P4-201ENST00000511877 1920 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC015813.6-201ENST00000624409 5808 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 MIR369-201ENST00000362155 70 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RNU6-335P-201ENST00000364563 113 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 SNORA4.3-201ENST00000365564 137 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RNU6-629P-201ENST00000384061 103 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RPS4XP7-201ENST00000406274 780 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.19□□□□□ -1.58
PRPF40AO75400 RNU6-1304P-201ENST00000411374 106 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RPS12P24-201ENST00000412619 387 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 RPL21P109-201ENST00000422213 475 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40AO75400 SNAP23P1-201ENST00000433229 246 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RPL5P30-201ENST00000465511 891 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 RPS29P22-201ENST00000472363 168 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 HSPE1P6-201ENST00000479457 291 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC108860.1-201ENST00000484521 383 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 HMGB3P15-201ENST00000507326 574 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC006499.6-201ENST00000511169 607 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AC104136.1-201ENST00000512969 394 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 IGKV1-32-201ENST00000519290 311 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF40AO75400 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AC020661.2-201ENST00000560114 134 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AC091042.1-201ENST00000579213 173 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF40AO75400 AL161616.1-201ENST00000611867 286 ntBASIC5.19□□□□□ -1.58
PRPF40AO75400 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40AO75400 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40AO75400 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
PRPF40AO75400 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF40AO75400 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PRPF40AO75400 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40AO75400 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF40AO75400 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40AO75400 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF40AO75400 RHOT1P2-201ENST00000366423 333 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 SNORD116-11-201ENST00000383882 92 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AL590704.1-201ENST00000402856 794 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 RN7SKP100-201ENST00000411258 284 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 BX510359.2-201ENST00000417920 305 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 BX842559.1-201ENST00000419615 532 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AL669831.1-202ENST00000428504 417 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 FABP5P14-201ENST00000437273 393 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AC069285.2-201ENST00000440210 275 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 AC008264.1-201ENST00000447612 367 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 AC008526.1-201ENST00000509149 338 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 AC005741.1-201ENST00000511094 432 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF40AO75400 APOOP3-201ENST00000536787 586 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AP001880.2-201ENST00000538233 448 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 DYNLL1P4-201ENST00000549314 266 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 IMMP1LP2-201ENST00000552954 492 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 RPL23AP87-202ENST00000573039 466 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF40AO75400 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.18□□□□□ -1.58
PRPF40AO75400 BPIFA4P-203ENST00000603168 689 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AL670379.10-201ENST00000604330 253 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AL670379.9-201ENST00000605428 253 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 AC022418.1-201ENST00000624118 445 ntBASIC5.18□□□□□ -1.58
PRPF40AO75400 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms