Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM3O75382 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM3O75382 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AL049874.1-201ENST00000489560 388 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 OR2A20P-203ENST00000498397 1268 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 RN7SKP272-201ENST00000516988 232 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 SNORA31.21-201ENST00000517180 77 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC009812.2-201ENST00000517657 457 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.76□□□□□ -1.97
TRIM3O75382 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM3O75382 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM3O75382 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM3O75382 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
TRIM3O75382 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM3O75382 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM3O75382 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM3O75382 MIR4760-201ENST00000585040 80 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM3O75382 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM3O75382 AC234772.3-201ENST00000602277 528 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AL137843.1-201ENST00000605078 385 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC093732.2-201ENST00000607950 274 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC135507.2-201ENST00000612443 309 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 ATP5A1P2-202ENST00000616464 443 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 MIR6130-201ENST00000619419 109 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 Z99129.2-201ENST00000619967 314 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC079597.1-201ENST00000624306 508 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AC068880.5-201ENST00000624331 290 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 AL355596.1-201ENST00000565399 3996 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM3O75382 AC005832.2-201ENST00000538921 1430 ntBASIC2.76□□□□□ -1.97
TRIM3O75382 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM3O75382 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM3O75382 RNU6-433P-201ENST00000363216 104 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RNU6-931P-201ENST00000363850 107 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RNU4-28P-201ENST00000364739 141 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RNU6-723P-201ENST00000383973 107 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RSL24D1P4-201ENST00000400938 484 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 NDUFB4P4-201ENST00000404822 243 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 MTCO1P17-201ENST00000411522 491 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM3O75382 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM3O75382 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM3O75382 snoU13.28-201ENST00000459235 104 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 HSPE1P6-201ENST00000479457 291 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RN7SL20P-201ENST00000488827 297 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.75□□□□□ -1.97
TRIM3O75382 MRPS36P3-201ENST00000519284 130 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM3O75382 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC022080.3-201ENST00000544433 482 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC090888.1-201ENST00000561335 1141 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AL354943.1-201ENST00000572103 781 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC011471.1-201ENST00000585766 187 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM3O75382 AL357094.1-201ENST00000603845 844 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC013244.3-201ENST00000605614 388 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 RNU6-88P-201ENST00000606801 100 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC097468.3-201ENST00000607956 456 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AC024560.3-201ENST00000608482 349 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AL603758.1-201ENST00000618654 241 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM3O75382 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TRIM3O75382 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TRIM3O75382 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
TRIM3O75382 TPTE2P4-201ENST00000258589 1605 ntBASIC2.75□□□□□ -1.97
TRIM3O75382 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM3O75382 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM3O75382 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TRIM3O75382 RPL21P132-201ENST00000331267 462 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TRIM3O75382 SNORD113-6-201ENST00000363345 75 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 RNU6-637P-201ENST00000384050 107 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM3O75382 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM3O75382 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 MTCO2P17-201ENST00000424336 677 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM3O75382 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM3O75382 ARPC3P1-201ENST00000437218 533 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM3O75382 AC080014.1-201ENST00000496877 1201 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 AIG1P1-201ENST00000503376 148 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 AC093809.1-201ENST00000509155 340 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM3O75382 MTND5P4-201ENST00000514978 288 ntBASIC2.74□□□□□ -1.97
TRIM3O75382 RNU6-798P-201ENST00000516912 103 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms