Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.96□□□□□ -1.62
VAMP4O75379 BX276092.4-201ENST00000452056 248 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 RPL21P11-201ENST00000461458 483 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 RPS26P15-201ENST00000488067 348 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AC025445.1-201ENST00000502728 300 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.96□□□□□ -1.62
VAMP4O75379 RN7SKP277-201ENST00000516895 283 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AP005639.2-201ENST00000527592 928 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.96□□□□□ -1.62
VAMP4O75379 AP003072.1-201ENST00000531740 145 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 SCOCP1-201ENST00000554676 349 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AL121821.2-201ENST00000556081 394 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.96□□□□□ -1.62
VAMP4O75379 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.96□□□□□ -1.62
VAMP4O75379 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.96□□□□□ -1.62
VAMP4O75379 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.96□□□□□ -1.62
VAMP4O75379 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.96□□□□□ -1.62
VAMP4O75379 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.96□□□□□ -1.62
VAMP4O75379 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAMP4O75379 AL359893.1-201ENST00000447628 1580 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VAMP4O75379 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VAMP4O75379 AC073343.1-201ENST00000328239 651 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 Y_RNA.126-201ENST00000363382 111 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 RNU6-1078P-201ENST00000364522 103 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 Y_RNA.387-201ENST00000383918 102 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 MIR124-3-201ENST00000384866 87 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VAMP4O75379 SOD2P1-201ENST00000396543 562 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 ARL5AP1-201ENST00000418991 388 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.95□□□□□ -1.62
VAMP4O75379 FTH1P6-201ENST00000430768 320 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 RPL36AP6-201ENST00000435770 321 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 RPL35AP22-201ENST00000436855 335 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 SNORA71B-202ENST00000439232 272 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AC073587.1-201ENST00000447093 876 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.95□□□□□ -1.62
VAMP4O75379 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.95□□□□□ -1.62
VAMP4O75379 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.95□□□□□ -1.62
VAMP4O75379 AP000926.1-201ENST00000479573 241 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 RPL21P99-201ENST00000480369 423 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 RPS15AP36-201ENST00000492022 382 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AC017037.2-201ENST00000513850 890 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 MYL12AP1-201ENST00000518490 515 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 HMGB1P41-201ENST00000520234 440 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.95□□□□□ -1.62
VAMP4O75379 AC103843.2-201ENST00000530523 682 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VAMP4O75379 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.95□□□□□ -1.62
VAMP4O75379 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.95□□□□□ -1.62
VAMP4O75379 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.95□□□□□ -1.62
VAMP4O75379 MIR4424-201ENST00000585257 86 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.95□□□□□ -1.62
VAMP4O75379 AL591424.2-201ENST00000617023 128 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AL603758.1-201ENST00000618654 241 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.95□□□□□ -1.62
VAMP4O75379 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VAMP4O75379 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VAMP4O75379 AC068254.2-201ENST00000623938 3577 ntBASIC4.95□□□□□ -1.62
VAMP4O75379 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VAMP4O75379 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VAMP4O75379 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VAMP4O75379 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
VAMP4O75379 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 RNU6-552P-201ENST00000362869 119 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 U3.12-201ENST00000364498 214 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 RNU6-339P-201ENST00000384310 107 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AL451054.2-201ENST00000420896 202 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 HSPE1P1-201ENST00000421494 318 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AC024082.2-201ENST00000434771 238 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 Y_RNA.632-201ENST00000459189 102 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 AC092436.1-201ENST00000506450 503 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 FAM206BP-201ENST00000510179 541 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 TTC39CP1-201ENST00000512513 755 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 AC099669.2-201ENST00000616549 437 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AL158196.1-201ENST00000616786 434 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 AC040168.1-201ENST00000623594 991 ntBASIC4.94□□□□□ -1.62
VAMP4O75379 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
VAMP4O75379 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VAMP4O75379 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VAMP4O75379 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VAMP4O75379 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VAMP4O75379 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms