Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC009237.6-201ENST00000446969 424 ntBASIC2.59□□□□□ -2
NPHP4O75161 SNRPFP4-201ENST00000456366 242 ntBASIC2.59□□□□□ -2
NPHP4O75161 PABPC1P3-201ENST00000469174 459 ntBASIC2.59□□□□□ -2
NPHP4O75161 AC015908.1-201ENST00000478739 476 ntBASIC2.59□□□□□ -2
NPHP4O75161 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.59□□□□□ -2
NPHP4O75161 AC107393.1-201ENST00000512403 346 ntBASIC2.59□□□□□ -2
NPHP4O75161 AC087441.2-201ENST00000529141 262 ntBASIC2.59□□□□□ -2
NPHP4O75161 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.59□□□□□ -2
NPHP4O75161 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.59□□□□□ -2
NPHP4O75161 SNRPGP1-201ENST00000553864 222 ntBASIC2.59□□□□□ -2
NPHP4O75161 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.59□□□□□ -2
NPHP4O75161 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.59□□□□□ -2
NPHP4O75161 COX6CP3-201ENST00000580869 223 ntBASIC2.59□□□□□ -2
NPHP4O75161 GAS5-AS1-201ENST00000602767 694 ntBASIC2.59□□□□□ -2
NPHP4O75161 SGO1P1-201ENST00000603525 1447 ntBASIC2.59□□□□□ -2
NPHP4O75161 AP001330.4-201ENST00000604350 154 ntBASIC2.59□□□□□ -2
NPHP4O75161 DPRXP5-201ENST00000604662 539 ntBASIC2.59□□□□□ -2
NPHP4O75161 AC012360.2-201ENST00000609349 391 ntBASIC2.59□□□□□ -2
NPHP4O75161 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.59□□□□□ -2
NPHP4O75161 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.59□□□□□ -2
NPHP4O75161 AC005336.3-201ENST00000623833 2679 ntBASIC2.58□□□□□ -2
NPHP4O75161 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP4O75161 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.58□□□□□ -2
NPHP4O75161 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP4O75161 AL391987.6-201ENST00000305671 199 ntBASIC2.58□□□□□ -2
NPHP4O75161 MIR16-1-201ENST00000385271 89 ntBASIC2.58□□□□□ -2
NPHP4O75161 RPL21P75-201ENST00000396599 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 RPL21P28-201ENST00000401418 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC092447.6-201ENST00000414578 210 ntBASIC2.58□□□□□ -2
NPHP4O75161 TAF13P2-201ENST00000416876 286 ntBASIC2.58□□□□□ -2
NPHP4O75161 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.58□□□□□ -2
NPHP4O75161 AL606495.1-201ENST00000422100 813 ntBASIC2.58□□□□□ -2
NPHP4O75161 FAM204CP-201ENST00000424489 642 ntBASIC2.58□□□□□ -2
NPHP4O75161 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC012497.1-201ENST00000429392 575 ntBASIC2.58□□□□□ -2
NPHP4O75161 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.58□□□□□ -2
NPHP4O75161 PPP1R2P5-201ENST00000457256 603 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
NPHP4O75161 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.58□□□□□ -2
NPHP4O75161 AC011979.1-201ENST00000472300 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPHP4O75161 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC093591.1-201ENST00000491435 481 ntBASIC2.58□□□□□ -2
NPHP4O75161 RPL21P16-201ENST00000495531 483 ntBASIC2.58□□□□□ -2
NPHP4O75161 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.58□□□□□ -2
NPHP4O75161 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.58□□□□□ -2
NPHP4O75161 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.58□□□□□ -2
NPHP4O75161 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.58□□□□□ -2
NPHP4O75161 ARL2BPP2-201ENST00000550907 489 ntBASIC2.58□□□□□ -2
NPHP4O75161 LSM6P2-201ENST00000552208 177 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.58□□□□□ -2
NPHP4O75161 AL354943.1-201ENST00000572103 781 ntBASIC2.58□□□□□ -2
NPHP4O75161 MIR4789-201ENST00000577469 82 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.58□□□□□ -2
NPHP4O75161 AC090666.1-201ENST00000578241 445 ntBASIC2.58□□□□□ -2
NPHP4O75161 AL390240.1-201ENST00000612950 384 ntBASIC2.58□□□□□ -2
NPHP4O75161 MIR8084-201ENST00000614105 89 ntBASIC2.58□□□□□ -2
NPHP4O75161 AC034102.8-201ENST00000615146 484 ntBASIC2.58□□□□□ -2
NPHP4O75161 RMST_2.1-201ENST00000617263 136 ntBASIC2.58□□□□□ -2
NPHP4O75161 AL136164.4-201ENST00000625013 2135 ntBASIC2.58□□□□□ -2
NPHP4O75161 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.58□□□□□ -2
NPHP4O75161 AC233981.2-201ENST00000611524 1614 ntBASIC2.58□□□□□ -2
NPHP4O75161 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
NPHP4O75161 AP002907.1-201ENST00000606361 1430 ntBASIC2.57□□□□□ -2
NPHP4O75161 RNU6-353P-201ENST00000364266 108 ntBASIC2.57□□□□□ -2
NPHP4O75161 RNU6-619P-201ENST00000365146 108 ntBASIC2.57□□□□□ -2
NPHP4O75161 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NPHP4O75161 RNU6-821P-201ENST00000390995 107 ntBASIC2.57□□□□□ -2
NPHP4O75161 BX664727.1-201ENST00000416024 466 ntBASIC2.57□□□□□ -2
NPHP4O75161 MTCO3P12-201ENST00000416718 547 ntBASIC2.57□□□□□ -2
NPHP4O75161 RPS6P14-201ENST00000425165 719 ntBASIC2.57□□□□□ -2
NPHP4O75161 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.57□□□□□ -2
NPHP4O75161 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.57□□□□□ -2
NPHP4O75161 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.57□□□□□ -2
NPHP4O75161 TOMM22P6-201ENST00000465035 409 ntBASIC2.57□□□□□ -2
NPHP4O75161 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.57□□□□□ -2
NPHP4O75161 RPS23P3-201ENST00000470993 430 ntBASIC2.57□□□□□ -2
NPHP4O75161 GTF2IP9-201ENST00000502460 301 ntBASIC2.57□□□□□ -2
NPHP4O75161 AC096751.1-202ENST00000502691 1067 ntBASIC2.57□□□□□ -2
NPHP4O75161 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.57□□□□□ -2
NPHP4O75161 MYL12BP1-201ENST00000569826 507 ntBASIC2.57□□□□□ -2
NPHP4O75161 AP005136.1-201ENST00000579765 429 ntBASIC2.57□□□□□ -2
NPHP4O75161 AC098483.2-201ENST00000603158 454 ntBASIC2.57□□□□□ -2
NPHP4O75161 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPHP4O75161 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.57□□□□□ -2
NPHP4O75161 AC097372.4-201ENST00000625025 466 ntBASIC2.57□□□□□ -2
NPHP4O75161 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.57□□□□□ -2
NPHP4O75161 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.57□□□□□ -2
NPHP4O75161 BX649567.1-201ENST00000642071 1134 ntBASIC2.57□□□□□ -2
NPHP4O75161 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NPHP4O75161 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPHP4O75161 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NPHP4O75161 AL023807.1-201ENST00000407932 359 ntBASIC2.56□□□□□ -2
NPHP4O75161 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.56□□□□□ -2
NPHP4O75161 USP9YP27-201ENST00000418455 438 ntBASIC2.56□□□□□ -2
NPHP4O75161 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.56□□□□□ -2
NPHP4O75161 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms