Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 RNU6-301P-201ENST00000384277 107 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AL645937.1-202ENST00000421799 937 ntBASIC2.87□□□□□ -1.95
SDC3O75056 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 BX119904.4-201ENST00000424402 301 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC234781.2-201ENST00000426370 994 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.87□□□□□ -1.95
SDC3O75056 RPL7L1P10-201ENST00000427790 463 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 AC009237.8-201ENST00000445492 379 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AL606662.1-201ENST00000445763 553 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 RN7SL75P-201ENST00000461926 281 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AP001025.2-201ENST00000490908 477 ntBASIC2.87□□□□□ -1.95
SDC3O75056 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
SDC3O75056 AC104685.1-201ENST00000502445 371 ntBASIC2.87□□□□□ -1.95
SDC3O75056 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.87□□□□□ -1.95
SDC3O75056 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.87□□□□□ -1.95
SDC3O75056 MTCYBP43-201ENST00000513621 740 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC034159.1-201ENST00000513885 583 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 RN7SKP287-201ENST00000516546 266 ntBASIC2.87□□□□□ -1.95
SDC3O75056 SNORA31.22-201ENST00000517204 135 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.87□□□□□ -1.95
SDC3O75056 AL157394.1-201ENST00000562983 1224 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 AC078899.3-201ENST00000599065 212 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC021171.1-201ENST00000603137 706 ntBASIC2.87□□□□□ -1.95
SDC3O75056 AC103706.2-201ENST00000638080 240 ntBASIC2.87□□□□□ -1.95
SDC3O75056 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDC3O75056 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.87□□□□□ -1.95
SDC3O75056 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDC3O75056 AP000526.1-201ENST00000603308 1388 ntBASIC2.87□□□□□ -1.95
SDC3O75056 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SDC3O75056 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 RPL21P132-201ENST00000331267 462 ntBASIC2.86□□□□□ -1.95
SDC3O75056 U3.6-201ENST00000363622 211 ntBASIC2.86□□□□□ -1.95
SDC3O75056 MIR1305-201ENST00000408300 86 ntBASIC2.86□□□□□ -1.95
SDC3O75056 MTCO1P17-201ENST00000411522 491 ntBASIC2.86□□□□□ -1.95
SDC3O75056 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RPL7P8-201ENST00000411964 730 ntBASIC2.86□□□□□ -1.95
SDC3O75056 MTND1P21-201ENST00000412991 285 ntBASIC2.86□□□□□ -1.95
SDC3O75056 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.86□□□□□ -1.95
SDC3O75056 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.86□□□□□ -1.95
SDC3O75056 AC018630.2-202ENST00000422992 927 ntBASIC2.86□□□□□ -1.95
SDC3O75056 PPP1R11P2-201ENST00000423543 382 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL022400.1-201ENST00000423946 935 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 RSU1P2-202ENST00000437884 485 ntBASIC2.86□□□□□ -1.95
SDC3O75056 LSM1P1-201ENST00000438629 273 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.86□□□□□ -1.95
SDC3O75056 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
SDC3O75056 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.86□□□□□ -1.95
SDC3O75056 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC112653.1-201ENST00000443851 386 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AP000542.1-201ENST00000448473 371 ntBASIC2.86□□□□□ -1.95
SDC3O75056 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 AL109741.2-201ENST00000455561 343 ntBASIC2.86□□□□□ -1.95
SDC3O75056 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.86□□□□□ -1.95
SDC3O75056 SETP11-201ENST00000473027 690 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RN7SL429P-201ENST00000479090 223 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RN7SL432P-201ENST00000484057 298 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RN7SL489P-201ENST00000486185 223 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RN7SL327P-201ENST00000488659 223 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC034222.1-201ENST00000494052 532 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC022447.3-201ENST00000506865 495 ntBASIC2.86□□□□□ -1.95
SDC3O75056 HSPE1P23-201ENST00000509838 286 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RNA5SP217-201ENST00000515959 91 ntBASIC2.86□□□□□ -1.95
SDC3O75056 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.86□□□□□ -1.95
SDC3O75056 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
SDC3O75056 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 AP003461.1-201ENST00000528866 78 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC023538.1-201ENST00000534576 736 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 AC002400.1-201ENST00000569310 726 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC138761.3-201ENST00000579993 334 ntBASIC2.86□□□□□ -1.95
SDC3O75056 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SDC3O75056 AC093424.1-201ENST00000604999 338 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.86□□□□□ -1.95
SDC3O75056 AC072039.2-201ENST00000608883 439 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL161629.2-201ENST00000615347 275 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC021755.4-201ENST00000616620 456 ntBASIC2.86□□□□□ -1.95
SDC3O75056 RN7SL853P-201ENST00000617250 223 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AC007490.1-201ENST00000624321 703 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL159972.1-201ENST00000625150 448 ntBASIC2.86□□□□□ -1.95
SDC3O75056 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms