Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BX682237.1-201ENST00000415016 335 ntBASIC2.67□□□□□ -1.98
HCN1O60741 RPL22P18-201ENST00000417197 377 ntBASIC2.67□□□□□ -1.98
HCN1O60741 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 NDUFB4P6-201ENST00000436819 366 ntBASIC2.67□□□□□ -1.98
HCN1O60741 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HCN1O60741 SNRPEP7-201ENST00000438350 220 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN1O60741 LSM1P1-201ENST00000438629 273 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN1O60741 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 MTCO1P27-201ENST00000448269 226 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC104563.1-201ENST00000476147 376 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN1O60741 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 RN7SKP265-201ENST00000516448 223 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.67□□□□□ -1.98
HCN1O60741 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 AP000857.1-201ENST00000532151 543 ntBASIC2.67□□□□□ -1.98
HCN1O60741 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN1O60741 AC087465.1-201ENST00000560574 245 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.67□□□□□ -1.98
HCN1O60741 ELOCP29-201ENST00000588193 334 ntBASIC2.67□□□□□ -1.98
HCN1O60741 VN1R82P-201ENST00000601481 356 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AC107952.2-201ENST00000606048 486 ntBASIC2.67□□□□□ -1.98
HCN1O60741 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 AC004067.1-201ENST00000608733 700 ntBASIC2.67□□□□□ -1.98
HCN1O60741 AP000254.1-201ENST00000609934 520 ntBASIC2.67□□□□□ -1.98
HCN1O60741 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.67□□□□□ -1.98
HCN1O60741 MIR6130-201ENST00000619419 109 ntBASIC2.67□□□□□ -1.98
HCN1O60741 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HCN1O60741 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 AC009487.2-201ENST00000420969 6821 ntBASIC2.67□□□□□ -1.98
HCN1O60741 MTCO1P9-201ENST00000505577 1534 ntBASIC2.67□□□□□ -1.98
HCN1O60741 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.67□□□□□ -1.98
HCN1O60741 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HCN1O60741 RPL9P7-201ENST00000330965 580 ntBASIC2.66□□□□□ -1.98
HCN1O60741 FAM133CP-201ENST00000332869 704 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RNU4-28P-201ENST00000364739 141 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
HCN1O60741 Y_RNA.510-201ENST00000384511 114 ntBASIC2.66□□□□□ -1.98
HCN1O60741 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 AL008987.1-201ENST00000415528 237 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.66□□□□□ -1.98
HCN1O60741 PPP1R11P2-201ENST00000423543 382 ntBASIC2.66□□□□□ -1.98
HCN1O60741 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 MTCO2P17-201ENST00000424336 677 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 MTND1P32-201ENST00000433043 938 ntBASIC2.66□□□□□ -1.98
HCN1O60741 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 RPS20P5-201ENST00000434808 360 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RPL36AP6-201ENST00000435770 321 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 AL162389.1-201ENST00000449233 177 ntBASIC2.66□□□□□ -1.98
HCN1O60741 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 RN7SL297P-201ENST00000483161 293 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC021382.1-201ENST00000483523 359 ntBASIC2.66□□□□□ -1.98
HCN1O60741 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 AC034244.1-201ENST00000507687 207 ntBASIC2.66□□□□□ -1.98
HCN1O60741 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.66□□□□□ -1.98
HCN1O60741 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 MTCYBP43-201ENST00000513621 740 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC026801.2-201ENST00000515352 425 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RNA5SP367-201ENST00000516557 118 ntBASIC2.66□□□□□ -1.98
HCN1O60741 RNU5A-4P-201ENST00000516588 111 ntBASIC2.66□□□□□ -1.98
HCN1O60741 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.66□□□□□ -1.98
HCN1O60741 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.66□□□□□ -1.98
HCN1O60741 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.66□□□□□ -1.98
HCN1O60741 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 AL161629.2-201ENST00000615347 275 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC027309.3-201ENST00000623419 351 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC068880.5-201ENST00000624331 290 ntBASIC2.66□□□□□ -1.98
HCN1O60741 AC009039.2-201ENST00000624524 529 ntBASIC2.66□□□□□ -1.98
HCN1O60741 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCN1O60741 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.66□□□□□ -1.98
HCN1O60741 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HCN1O60741 AL355596.1-201ENST00000565399 3996 ntBASIC2.65□□□□□ -1.98
HCN1O60741 ZNF519P1-201ENST00000449011 1626 ntBASIC2.65□□□□□ -1.98
HCN1O60741 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HCN1O60741 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HCN1O60741 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
HCN1O60741 RNU6-114P-201ENST00000384704 105 ntBASIC2.65□□□□□ -1.99
HCN1O60741 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.65□□□□□ -1.99
HCN1O60741 RPS24P7-201ENST00000416921 246 ntBASIC2.65□□□□□ -1.99
HCN1O60741 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms