Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNND1O60716 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNND1O60716 BX510359.1-201ENST00000456973 237 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 RPS27AP1-201ENST00000475545 471 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNND1O60716 RNA5SP309-201ENST00000516670 106 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNND1O60716 FAM92A1P1-201ENST00000528023 890 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNND1O60716 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNND1O60716 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNND1O60716 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNND1O60716 MIR3690-201ENST00000580266 75 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNND1O60716 AL136363.1-201ENST00000605349 337 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AC007684.1-201ENST00000609671 477 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AC006023.2-201ENST00000609916 167 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNND1O60716 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNND1O60716 MIR3651-201ENST00000630427 90 ntBASIC4.26□□□□□ -1.73
CTNND1O60716 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNND1O60716 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNND1O60716 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNND1O60716 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNND1O60716 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CTNND1O60716 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNND1O60716 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNND1O60716 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 RNU6-517P-201ENST00000384362 110 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 AC073464.1-201ENST00000429823 534 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 C8orf59P1-201ENST00000429930 303 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC087650.1-201ENST00000431445 468 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 PSPHP1-201ENST00000450062 261 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.25□□□□□ -1.73
CTNND1O60716 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 SNORD97-201ENST00000459187 142 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 RN7SL807P-201ENST00000470923 297 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 HSPE1P6-201ENST00000479457 291 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNND1O60716 AC010342.1-201ENST00000514047 877 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 GMPSP1-201ENST00000514075 579 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 RNU6-390P-201ENST00000516259 103 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 SNORA70.18-201ENST00000516696 98 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 RNU6-1220P-201ENST00000517126 108 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 RNU6-840P-201ENST00000517275 65 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 NARSP2-201ENST00000518524 679 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC090572.1-201ENST00000519251 160 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.25□□□□□ -1.73
CTNND1O60716 AC093012.1-202ENST00000549403 582 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 ARL2BPP2-201ENST00000550907 489 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 RPL21P12-201ENST00000559810 515 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNND1O60716 AC105224.1-201ENST00000587055 421 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 AP003465.2-201ENST00000602571 373 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.25□□□□□ -1.73
CTNND1O60716 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTNND1O60716 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 SEPT14P19-203ENST00000633205 211 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 CR848007.1-201ENST00000442354 1699 ntBASIC4.25□□□□□ -1.73
CTNND1O60716 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTNND1O60716 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNND1O60716 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNND1O60716 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTNND1O60716 HSPE1P11-201ENST00000339579 310 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.24□□□□□ -1.73
CTNND1O60716 RNU6-1097P-201ENST00000363586 107 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 SNORA36C-201ENST00000384289 132 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.24□□□□□ -1.73
CTNND1O60716 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 FCF1P9-201ENST00000412546 282 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.24□□□□□ -1.73
CTNND1O60716 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC008850.1-201ENST00000427546 362 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 RPL7P28-201ENST00000437739 740 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC140076.1-201ENST00000449897 361 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC093392.2-201ENST00000450682 337 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 VN1R17P-201ENST00000472048 1090 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.24□□□□□ -1.73
CTNND1O60716 TRBV12-2-201ENST00000489763 344 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 MTND1P5-201ENST00000517906 940 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.24□□□□□ -1.73
CTNND1O60716 AC124947.2-202ENST00000552735 133 ntBASIC4.24□□□□□ -1.73
CTNND1O60716 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms