Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.67□□□□□ -1.82
SMAD6O43541 RPS29P4-201ENST00000414733 161 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 SNRPEP10-201ENST00000420249 274 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 GTF2IP20-201ENST00000431663 360 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 RPL7P54-201ENST00000438336 674 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 CALM1P1-201ENST00000442082 433 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC010655.1-201ENST00000449336 292 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC034236.1-201ENST00000469891 373 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 RPL31P50-201ENST00000471002 296 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AC104986.1-201ENST00000517978 436 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 NARSP2-201ENST00000518524 679 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 OR5B10P-201ENST00000532869 642 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.67□□□□□ -1.82
SMAD6O43541 SUB1P2-201ENST00000556401 297 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.67□□□□□ -1.82
SMAD6O43541 LARP7P2-201ENST00000575306 125 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AC006254.3-201ENST00000603353 884 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AL136363.1-201ENST00000605349 337 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
SMAD6O43541 RNU6-87P-201ENST00000607561 108 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 RMST_3.1-201ENST00000611651 109 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 AL442067.2-201ENST00000614033 363 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SMAD6O43541 AC006504.8-201ENST00000621046 635 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.67□□□□□ -1.82
SMAD6O43541 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMAD6O43541 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.66□□□□□ -1.82
SMAD6O43541 HSPA8P1-201ENST00000425843 1833 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 Y_RNA.46-201ENST00000362695 102 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 RNY3P3-201ENST00000363816 102 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 Y_RNA.381-201ENST00000365666 102 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 Y_RNA.481-201ENST00000384373 102 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 RPL7P25-201ENST00000404151 721 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 RNU2-71P-201ENST00000411395 189 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 TPMTP2-201ENST00000414372 726 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC068533.1-201ENST00000418542 415 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC008280.1-201ENST00000418851 412 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 USP9YP20-201ENST00000419224 558 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 YME1L1P1-201ENST00000429435 297 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.66□□□□□ -1.82
SMAD6O43541 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.66□□□□□ -1.82
SMAD6O43541 HMGB3P12-201ENST00000438745 556 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 ARPC3P5-201ENST00000448802 534 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMAD6O43541 AC010301.1-201ENST00000473936 355 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 AC023194.1-201ENST00000493084 308 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC117522.3-201ENST00000507974 584 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 AC005798.1-201ENST00000513715 387 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.66□□□□□ -1.82
SMAD6O43541 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.66□□□□□ -1.82
SMAD6O43541 HSPE1P3-201ENST00000559254 309 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC074050.1-201ENST00000563247 211 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.66□□□□□ -1.82
SMAD6O43541 MTCO3P13-201ENST00000577757 781 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SMAD6O43541 AC005498.1-201ENST00000592125 465 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.66□□□□□ -1.82
SMAD6O43541 AC068722.2-201ENST00000618734 544 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 YWHAEP7-203ENST00000622054 312 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 AL357559.1-201ENST00000622228 274 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 U6.101-201ENST00000637707 76 ntBASIC3.66□□□□□ -1.82
SMAD6O43541 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMAD6O43541 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMAD6O43541 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMAD6O43541 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SMAD6O43541 RPL23AP57-201ENST00000332361 466 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 Y_RNA.72-201ENST00000362894 103 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 RNU6-451P-201ENST00000362921 107 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 PRRC2CP1-201ENST00000404428 159 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC127391.1-201ENST00000411737 98 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.65□□□□□ -1.83
SMAD6O43541 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms