Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RN7SKP272-201ENST00000516988 232 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SLC28A1O00337 MIR4307-201ENST00000582802 84 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC034229.4-201ENST00000607861 441 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.88□□□□□ -1.95
SLC28A1O00337 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 Z99129.2-201ENST00000619967 314 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC28A1O00337 AC097655.1-201ENST00000635075 318 ntBASIC2.88□□□□□ -1.95
SLC28A1O00337 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC28A1O00337 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SLC28A1O00337 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SLC28A1O00337 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.87□□□□□ -1.95
SLC28A1O00337 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC28A1O00337 CCNG1P1-201ENST00000406783 885 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 RNU2-33P-201ENST00000410344 192 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC129850.1-201ENST00000436203 508 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 MTND4LP3-201ENST00000468320 276 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 KC877373.1-201ENST00000479066 408 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 RPS29P2-201ENST00000479278 136 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 OR2A20P-203ENST00000498397 1268 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 SNORA31.21-201ENST00000517180 77 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 ATP5F1P5-201ENST00000526403 760 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC034105.3-201ENST00000565294 442 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC068135.2-201ENST00000569293 1028 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.87□□□□□ -1.95
SLC28A1O00337 AC083760.1-201ENST00000589621 670 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AL161729.4-201ENST00000604650 476 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC28A1O00337 AC103710.1-201ENST00000610003 901 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.87□□□□□ -1.95
SLC28A1O00337 AC007671.2-201ENST00000637344 619 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 API5P2-201ENST00000397055 1498 ntBASIC2.87□□□□□ -1.95
SLC28A1O00337 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SLC28A1O00337 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SLC28A1O00337 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 AC010680.1-201ENST00000590024 3590 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 RNA5SP72-201ENST00000364442 117 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 U8.14-201ENST00000390843 143 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 RAP1BP1-201ENST00000412709 553 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 AL451074.5-201ENST00000415894 435 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC099548.1-201ENST00000421443 426 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC092047.1-201ENST00000424997 240 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC28A1O00337 ARPC3P1-201ENST00000437218 533 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AL049734.2-201ENST00000441066 616 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 DDX3P2-201ENST00000446138 111 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC28A1O00337 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.86□□□□□ -1.95
SLC28A1O00337 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AL672167.3-201ENST00000465951 960 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.86□□□□□ -1.95
SLC28A1O00337 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.86□□□□□ -1.95
SLC28A1O00337 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 AC108043.1-201ENST00000512696 574 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC123904.3-201ENST00000547218 814 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 AC009094.1-201ENST00000564443 426 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC008751.2-201ENST00000597885 980 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.86□□□□□ -1.95
SLC28A1O00337 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC28A1O00337 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.86□□□□□ -1.95
SLC28A1O00337 MTND1P37-201ENST00000636562 264 ntBASIC2.86□□□□□ -1.95
SLC28A1O00337 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SLC28A1O00337 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.86□□□□□ -1.95
SLC28A1O00337 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
SLC28A1O00337 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SLC28A1O00337 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SLC28A1O00337 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SLC28A1O00337 SNORA63.1-201ENST00000362493 131 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 RNU5A-8P-201ENST00000364102 114 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 RNA5SP267-201ENST00000364893 126 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 RNA5SP120-201ENST00000410900 112 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 USP9YP26-201ENST00000421008 661 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.85□□□□□ -1.95
SLC28A1O00337 RPS27AP14-201ENST00000422868 454 ntBASIC2.85□□□□□ -1.95
SLC28A1O00337 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.85□□□□□ -1.95
SLC28A1O00337 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms