Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RSU1P2-202ENST00000437884 485 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 UBE2D3P4-201ENST00000441973 436 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 RPL23AP35-201ENST00000451906 501 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC011825.1-201ENST00000484967 388 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 LINC00888-204ENST00000487386 421 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 RNF138P1-201ENST00000502765 546 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC005178.1-201ENST00000508392 440 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC117522.2-201ENST00000510049 657 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 SNORA31.20-201ENST00000517111 133 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 OR4P1P-201ENST00000530808 1136 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 ISCA1P3-201ENST00000577104 373 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC090616.2-202ENST00000584248 222 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 MIR548AB-201ENST00000584917 84 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 XIAPP1-201ENST00000603162 600 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AL390208.1-201ENST00000605885 644 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC245008.1-201ENST00000608123 476 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC107214.2-201ENST00000608204 634 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AC004908.3-201ENST00000610248 625 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 CYP3A51P-201ENST00000633513 256 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 PABPC1P9-201ENST00000426076 1612 ntBASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49D1C9J1S8 NUP58P1-201ENST00000502546 1738 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 Y_RNA.97-201ENST00000363094 102 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 TMSB4XP8-201ENST00000402089 135 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL356131.1-201ENST00000405826 414 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 RNU6-920P-201ENST00000410926 92 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 TMSB4XP6-201ENST00000415187 135 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 NPM1P11-201ENST00000417106 855 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 SSXP9-201ENST00000417503 292 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 TMSB4XP1-201ENST00000424567 135 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC234781.2-201ENST00000426370 994 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL590233.1-201ENST00000430017 456 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 RPL23AP20-201ENST00000447965 421 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 MTCO1P27-201ENST00000448269 226 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 KATNBL1P6-201ENST00000453433 915 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC072039.1-201ENST00000477611 581 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC010486.3-201ENST00000511602 785 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 RNA5SP282-201ENST00000516355 108 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL356057.1-201ENST00000533798 831 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC010620.1-201ENST00000601088 1102 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AP001981.2-201ENST00000603241 418 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AL596327.1-201ENST00000603629 213 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC135507.2-201ENST00000612443 309 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 PCMTD1P7-201ENST00000634506 357 ntBASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM49D1C9J1S8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
TRIM49D1C9J1S8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM49D1C9J1S8 ZNF734P-201ENST00000419494 1534 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms