Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 RN7SKP277-201ENST00000516895 283 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 RNU6-56P-201ENST00000516986 93 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AF279873.1-201ENST00000523393 313 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC239860.2-201ENST00000525886 270 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 NOP56P3-201ENST00000549457 385 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC004217.3-201ENST00000551552 878 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AP002906.1-201ENST00000603405 233 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 LLPHP1-201ENST00000603571 367 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL391646.1-201ENST00000603860 190 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC135178.6-201ENST00000605314 398 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL450270.1-201ENST00000606160 391 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 MIR6864-201ENST00000617935 70 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 CR381572.1-201ENST00000625098 102 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 SEC63P2-201ENST00000503863 1939 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 MTCO2P31-201ENST00000402702 684 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 MTATP6P19-201ENST00000413797 659 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 BX510359.4-201ENST00000423750 193 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC092634.2-201ENST00000428146 1010 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL512637.2-201ENST00000431287 1256 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL929288.2-201ENST00000446368 407 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL096803.2-201ENST00000450032 677 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 ARPC3P2-201ENST00000457786 533 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 MTND3P24-201ENST00000506306 329 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC010468.3-201ENST00000508225 458 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AP003717.3-201ENST00000544832 1180 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC092470.1-201ENST00000546187 132 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC079148.1-201ENST00000565944 819 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC095057.3-201ENST00000567102 1157 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC016727.2-201ENST00000603988 621 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 SUMO2P14-201ENST00000604488 293 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 RNA5SP108-201ENST00000605921 117 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 U73479.1-201ENST00000618062 168 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AP000943.4-201ENST00000622912 357 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AC073592.7-201ENST00000623659 507 ntBASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
COL6A6A6NMZ7 AL136164.4-201ENST00000625013 2135 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 UBE2V1P15-201ENST00000407776 448 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 PTGES3P2-201ENST00000407942 482 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 RN7SKP101-201ENST00000411376 320 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC099677.1-201ENST00000420575 175 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 RPL23AP7-203ENST00000449021 469 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 RNU6-717P-201ENST00000459076 104 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC104115.2-201ENST00000523026 687 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 OSBPL9P3-201ENST00000534523 595 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC006518.2-201ENST00000542513 940 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC007375.1-201ENST00000554513 578 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 MTCO3P24-201ENST00000572729 782 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AL133393.1-201ENST00000603277 287 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC011468.4-201ENST00000603942 409 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC012640.5-201ENST00000623897 319 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AL109659.3-201ENST00000624985 950 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AL133216.2-202ENST00000634512 349 ntBASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL6A6A6NMZ7 MCTS2P-201ENST00000394552 546 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 RPL19P1-201ENST00000411635 428 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 BX664727.1-201ENST00000416024 466 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 HMGN1P33-201ENST00000432945 451 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 HMGB1P45-201ENST00000435986 653 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 Z77249.1-201ENST00000444622 1175 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AL590664.1-201ENST00000448065 339 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 AC025768.1-201ENST00000510057 267 ntBASIC1.43□□□□□ -2.18
COL6A6A6NMZ7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms