Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC78A2IDD5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MAPK10-373ENST00000641983 6772 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RNU4-79P-201ENST00000362764 141 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 Y_RNA.231-201ENST00000364358 102 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RNU6-629P-201ENST00000384061 103 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 SNORA70C-201ENST00000384538 135 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR514A2-201ENST00000385131 88 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR514A3-201ENST00000385132 88 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RNU6-332P-201ENST00000391193 108 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 SNORA57.1-201ENST00000391227 145 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 FAT1P1-201ENST00000406588 507 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR1302-11-201ENST00000408051 138 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR1302-9-201ENST00000408365 138 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR1302-10-201ENST00000408734 138 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RNU2-39P-201ENST00000410604 198 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RNU6-516P-201ENST00000411381 104 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MTND3P8-201ENST00000412909 339 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC092447.6-201ENST00000414578 210 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL358472.1-201ENST00000431295 329 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 ERLEC1P1-201ENST00000433806 578 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 IFNA20P-201ENST00000436840 528 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 HMGN2P26-201ENST00000463169 339 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC017037.2-201ENST00000513850 890 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 Y_RNA.701-201ENST00000516812 110 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC105029.1-201ENST00000520250 669 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC103783.1-201ENST00000520506 373 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 PSMA3P-201ENST00000555485 635 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 MIR1302-2-201ENST00000607096 138 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL022345.1-201ENST00000607292 135 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC093913.1-201ENST00000614178 329 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC009248.2-201ENST00000619826 254 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL773545.4-201ENST00000637262 310 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AL513478.4-201ENST00000641636 310 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 AC018555.1-201ENST00000567548 1980 ntBASIC4.11□□□□□ -1.75
CCDC78A2IDD5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC78A2IDD5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC244517.1-201ENST00000606030 2086 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 MAPK10-372ENST00000641954 3413 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RNU6-39P-201ENST00000384344 107 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RN7SKP27-201ENST00000410684 333 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC006480.1-201ENST00000449887 378 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RPL7P19-201ENST00000469948 618 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RPS27AP1-201ENST00000475545 471 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RPS3AP50-201ENST00000487064 803 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC78A2IDD5 AC020893.1-201ENST00000502452 580 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 RN7SKP219-201ENST00000516825 296 ntBASIC4.1□□□□□ -1.75
CCDC78A2IDD5 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms