Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 HMGB1P6-201ENST00000569046 646 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 FAM60BP-201ENST00000578364 658 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 AC004067.1-201ENST00000608733 700 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 FRG1KP-201ENST00000623592 341 ntBASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.59□□□□□ -1.83
TCRBV7S3A2A0A539 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TCRBV7S3A2A0A539 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TCRBV7S3A2A0A539 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.84
TCRBV7S3A2A0A539 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-960P-201ENST00000364056 120 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1322P-201ENST00000364309 107 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 MIR1-2-201ENST00000384961 85 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 SNORA11B-201ENST00000408175 129 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC079780.1-201ENST00000428259 207 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 USP12PX-201ENST00000432383 1057 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AL596276.1-201ENST00000434465 418 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RPL36AP6-201ENST00000435770 321 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC122718.1-201ENST00000439448 744 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RPL26P6-201ENST00000440913 438 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC027673.1-201ENST00000456245 405 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 FAM133DP-201ENST00000464802 691 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC010631.1-201ENST00000474150 156 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 RPL36AP51-201ENST00000487216 318 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 MTAPP1-201ENST00000489154 819 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC109635.3-201ENST00000529536 185 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 AP001350.1-201ENST00000601906 1524 ntBASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TCRBV7S3A2A0A539 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC073343.1-201ENST00000328239 651 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL133412.1-201ENST00000380194 2992 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-606P-201ENST00000384721 111 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 TXNP7-201ENST00000406296 293 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 MTND1P2-201ENST00000430604 821 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC024082.2-201ENST00000434771 238 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 ZNF680P1-201ENST00000436625 1469 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 RPS3AP46-201ENST00000448352 682 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 FDX1P2-201ENST00000450769 375 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL356010.1-201ENST00000456364 102 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SL385P-201ENST00000468873 276 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC083798.1-201ENST00000472671 131 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC126389.1-201ENST00000477436 290 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 RPL31P13-201ENST00000484151 370 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 FAM92A1P2-202ENST00000504766 877 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 EXOC5P1-201ENST00000510543 1969 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC005921.1-201ENST00000510589 286 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC023141.12-201ENST00000512399 199 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 HMGB1P41-201ENST00000520234 440 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 OR4R1P-201ENST00000529879 463 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 HIGD1AP5-201ENST00000529959 259 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 OR5BN1P-201ENST00000532955 829 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AL133241.1-201ENST00000556832 487 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC116096.1-201ENST00000566804 2314 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AF038458.1-201ENST00000588406 262 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC007621.1-201ENST00000604544 437 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 Z84480.1-201ENST00000605131 311 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms