Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 FAT1P1-201ENST00000406588 507 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 RNU2-43P-201ENST00000410306 190 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 MTATP6P18-201ENST00000417994 673 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 MTCO1P20-201ENST00000425366 358 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL358472.1-201ENST00000431295 329 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 NDUFA5P4-201ENST00000436704 385 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC016696.1-201ENST00000446949 318 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC140076.1-201ENST00000449897 361 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 RPS11P1-201ENST00000451072 473 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 PRSS3P4-201ENST00000453323 162 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC022364.2-201ENST00000457963 554 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC010285.1-201ENST00000470580 392 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 RPS15AP36-201ENST00000492022 382 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 FTH1P9-201ENST00000513251 355 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 RNU6-64P-201ENST00000517119 105 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC026403.1-201ENST00000518938 295 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 IGLV3-26-201ENST00000520756 302 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL034351.1-201ENST00000605288 668 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL050343.2-201ENST00000607338 280 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.812-201ENST00000610788 101 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.784-201ENST00000613803 101 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AL391261.4-201ENST00000616012 481 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.787-201ENST00000616522 101 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.780-201ENST00000617336 101 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.801-201ENST00000619005 101 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 YWHAEP7-203ENST00000622054 312 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC187A0A096LP49 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AP004289.2-201ENST00000444413 1457 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC138915.3-201ENST00000562908 1389 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 SNORD56.2-201ENST00000363242 71 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RNU6-511P-201ENST00000363496 107 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RNU1-39P-201ENST00000383897 165 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.573-201ENST00000384763 105 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RNA5SP107-201ENST00000411358 122 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 SSXP9-201ENST00000417503 292 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 HMGB3P20-201ENST00000417997 600 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC005094.1-201ENST00000440420 368 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 snoU13.24-201ENST00000458998 104 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RNU2-10P-201ENST00000516375 211 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 SCARNA24.1-201ENST00000516465 137 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 Y_RNA.693-201ENST00000516641 110 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RNU6-410P-201ENST00000517006 107 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 IGKV2-23-201ENST00000518729 323 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 OR5D17P-201ENST00000531492 978 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC128657.1-201ENST00000549459 145 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 ARL2BPP2-201ENST00000550907 489 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC125611.2-201ENST00000551907 647 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL512360.1-201ENST00000555346 234 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL359212.1-201ENST00000556608 614 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 RPL23AP87-202ENST00000573039 466 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 MIR3671-201ENST00000580455 88 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 MIR4795-201ENST00000584182 89 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC098848.2-201ENST00000588023 330 ntBASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC187A0A096LP49 AL353748.2-201ENST00000622148 471 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms