Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNU6-843P-201ENST00000384454 104 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-15P-201ENST00000384534 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-2-201ENST00000384627 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-29P-201ENST00000384637 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-9-201ENST00000384776 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 MIR600-201ENST00000385007 98 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 SNORD12B-201ENST00000410433 91 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 snoU13.7-201ENST00000459220 104 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RPS29P22-201ENST00000472363 168 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNA5SP228-201ENST00000516232 133 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 IGLVIV-53-201ENST00000520107 367 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC005191.1-201ENST00000603950 358 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-6P-201ENST00000606623 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC104964.3-201ENST00000606115 2860 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RNA5SP391-201ENST00000363456 119 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-318P-201ENST00000384283 103 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 MIR1182-201ENST00000408363 97 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AL592148.1-201ENST00000413568 445 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AC234781.4-201ENST00000419384 244 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 snoU13.30-201ENST00000458951 104 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RN7SL591P-201ENST00000496150 292 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 Y_RNA.797-201ENST00000515977 94 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 SNORA31.3-201ENST00000516029 96 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RNU1-86P-201ENST00000516108 154 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RNU1-107P-201ENST00000516617 154 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AC090616.3-201ENST00000582184 217 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 snoU18.1-201ENST00000629629 71 ntBASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CCDC61Q9Y6R9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 RN7SKP227-201ENST00000364445 330 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 SNORD56-201ENST00000413522 71 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AL031736.2-201ENST00000426573 787 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 LINC02210-201ENST00000444561 288 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 RN7SL860P-201ENST00000473738 223 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AC083982.1-201ENST00000485679 344 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AC007686.1-201ENST00000488511 463 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 HMGB3P16-201ENST00000508037 287 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AC091912.1-201ENST00000511351 248 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AC107027.2-201ENST00000512197 115 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 SNORA40.9-201ENST00000515895 93 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 TRAV28-201ENST00000557548 323 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 MIR4431-201ENST00000579990 94 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 AC091905.4-201ENST00000623432 202 ntBASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
CCDC61Q9Y6R9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 AL731532.2-201ENST00000623542 1953 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-626P-201ENST00000363354 107 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 RNU4-9P-201ENST00000364951 139 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-1175P-201ENST00000365200 107 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 HIGD1AP2-201ENST00000446367 280 ntBASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC7.28□□□□□ -1.24
CCDC61Q9Y6R9 RPL21P6-201ENST00000479171 504 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms