Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 AC004656.1-201ENST00000568479 4951 ntBASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 AL034546.1-201ENST00000623740 3693 ntBASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 AC099654.2-201ENST00000433031 1980 ntBASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 MTND5P35-201ENST00000557537 1720 ntBASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 AC009541.1-201ENST00000438279 2662 ntBASIC5.91□□□□□ -1.46
VPS9D1Q9Y2B5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 RNA5SP110-201ENST00000362638 115 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 SNORA25.7-201ENST00000364375 127 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 RN7SKP186-201ENST00000365371 303 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 MIR10B-201ENST00000385011 110 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC016739.1-201ENST00000405359 345 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC006461.1-201ENST00000412637 326 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC023141.3-201ENST00000436698 278 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 IGKV2D-36-201ENST00000518643 226 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 MIR7109-201ENST00000613748 65 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 AL139099.4-201ENST00000614802 114 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 MIR6721-201ENST00000617181 87 ntBASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS9D1Q9Y2B5 BCORP1-203ENST00000513194 5093 ntBASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 AF127577.6-201ENST00000623352 2191 ntBASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
VPS9D1Q9Y2B5 SRP72P2-201ENST00000344851 1979 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 SNORA72.2-201ENST00000365028 127 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-1275P-201ENST00000391087 107 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AL158156.1-201ENST00000422509 473 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 MRPS21P2-201ENST00000424704 264 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 FHP1-201ENST00000442741 703 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 Y_RNA.637-201ENST00000459424 114 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 GMPSP1-201ENST00000514075 579 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC021269.2-201ENST00000532318 330 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC109810.1-201ENST00000534066 224 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 MIR4782-201ENST00000577987 79 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 MIR3646-201ENST00000578301 84 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC068768.2-201ENST00000602352 343 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 AC107294.1-201ENST00000609524 467 ntBASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS9D1Q9Y2B5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC092079.1-201ENST00000558620 1985 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-336P-201ENST00000364891 107 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms