Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC091564.4-201ENST00000533934 2194 ntBASIC2.49□□□□□ -2.01
TRAPPC4Q9Y296 AL513185.3-201ENST00000433335 1300 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SNORA4.1-201ENST00000364263 144 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RSL24D1P4-201ENST00000400938 484 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RNU2-43P-201ENST00000410306 190 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 PIGPP2-201ENST00000411569 458 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RPS24P7-201ENST00000416921 246 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SNRPEP7-201ENST00000438350 220 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 MTCYBP34-201ENST00000439552 670 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SNORD121B-201ENST00000458838 81 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 snoU13.8-201ENST00000458890 104 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC097462.2-201ENST00000504623 481 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC091826.1-201ENST00000514065 313 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RNA5SP216-201ENST00000516111 123 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-528P-201ENST00000516926 100 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 MRPS36P3-201ENST00000519284 130 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 OR7K1P-201ENST00000546439 926 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 MTND1P24-201ENST00000552175 861 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AL391001.1-201ENST00000602747 715 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC090186.1-201ENST00000605991 572 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AC106028.5-201ENST00000610332 395 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 AL590099.1-201ENST00000615276 138 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 MIR6076-201ENST00000617521 113 ntBASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
TRAPPC4Q9Y296 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 FRG1BP-201ENST00000278882 761 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL161781.1-201ENST00000354277 403 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-462P-201ENST00000362659 105 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-931P-201ENST00000363850 107 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RNU6-777P-201ENST00000364265 104 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 SNORA18.3-201ENST00000384122 132 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL138827.1-201ENST00000402666 306 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RPS3AP24-201ENST00000407896 734 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RAP1BP1-201ENST00000412709 553 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL008987.1-201ENST00000415528 237 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 MTCO2P21-201ENST00000419780 677 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL121871.1-201ENST00000443413 436 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RAC1P7-201ENST00000445367 377 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC009961.3-201ENST00000449832 765 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 ANKRD26P4-201ENST00000455755 950 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC104563.1-201ENST00000476147 376 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RPL30P14-201ENST00000482744 348 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 FAM172BP-201ENST00000487497 1089 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC024589.1-201ENST00000512207 263 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC022483.1-201ENST00000514020 567 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RN7SKP265-201ENST00000516448 223 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC125611.2-201ENST00000551907 647 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC013444.2-201ENST00000603317 787 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC025588.2-201ENST00000604851 466 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL136981.2-201ENST00000617319 734 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 SNHG22-203ENST00000617833 660 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 MIR6130-201ENST00000619419 109 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AL137790.1-201ENST00000634283 177 ntBASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.47□□□□□ -2.01
TRAPPC4Q9Y296 AC087359.1-201ENST00000508335 1740 ntBASIC2.46□□□□□ -2.02
TRAPPC4Q9Y296 CUL1P1-201ENST00000509510 2425 ntBASIC2.46□□□□□ -2.02
TRAPPC4Q9Y296 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRAPPC4Q9Y296 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TRAPPC4Q9Y296 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms