Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC125611.2-201ENST00000551907 647 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 MTATP6P3-201ENST00000581686 676 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AC097468.3-201ENST00000607956 456 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 AL354685.2-201ENST00000448218 1447 ntBASIC2.07□□□□□ -2.08
SHANK2Q9UPX8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 GTF2IP7-202ENST00000436677 309 ntBASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 HMGB3P3-201ENST00000510526 400 ntBASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 CENPUP2-201ENST00000555897 1186 ntBASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 AC079597.1-201ENST00000624306 508 ntBASIC2.06□□□□□ -2.08
SHANK2Q9UPX8 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AP000560.1-201ENST00000624150 1937 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 RNU6-1331P-201ENST00000363658 106 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AL356057.2-201ENST00000403318 432 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AL034374.1-201ENST00000406329 351 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC096992.1-201ENST00000459808 709 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC023813.2-201ENST00000564321 469 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 MIR3122-201ENST00000577243 73 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC006065.5-201ENST00000623427 349 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AP000648.3-201ENST00000623539 4507 ntBASIC2.05□□□□□ -2.08
SHANK2Q9UPX8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 SNORD114-27-201ENST00000363766 70 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 RNU2-25P-201ENST00000411041 191 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 RPS3AP22-201ENST00000488297 769 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AC087808.1-201ENST00000520501 361 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 GLYCAM1-201ENST00000546596 285 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AL355816.1-201ENST00000607951 118 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AC019131.2-201ENST00000609071 870 ntBASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.04□□□□□ -2.08
SHANK2Q9UPX8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 SNORA40.6-201ENST00000391153 128 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AC005534.2-201ENST00000431047 433 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AL591704.1-201ENST00000432574 275 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 Z85994.2-201ENST00000434327 452 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 FABP5P3-201ENST00000437960 408 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 NF1P3-201ENST00000457709 450 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 RBM43P1-201ENST00000476891 1081 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AL121821.2-201ENST00000556081 394 ntBASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.03□□□□□ -2.08
SHANK2Q9UPX8 Y_RNA.68-201ENST00000362881 102 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RNA5SP363-201ENST00000365072 115 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RNU6-1080P-201ENST00000383982 107 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RNU6-1032P-201ENST00000384100 107 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RPL26P37-201ENST00000411983 438 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 Z75741.2-201ENST00000417272 1167 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AL022400.1-201ENST00000423946 935 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AL121871.1-201ENST00000443413 436 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 MTND1P18-201ENST00000448191 573 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 snoU13.3-201ENST00000459441 104 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 MRPL42P6-201ENST00000486397 371 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 DNAJC8P1-201ENST00000554535 372 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RN7SL793P-201ENST00000583259 296 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AC096586.2-201ENST00000610260 441 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AP000676.4-201ENST00000624659 623 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 RNF6P1-201ENST00000444889 1784 ntBASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.02□□□□□ -2.09
SHANK2Q9UPX8 SNORA7.2-201ENST00000364446 145 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC244098.2-201ENST00000422068 99 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AF279873.1-201ENST00000523393 313 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC084364.2-201ENST00000546924 395 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 TRAV28-201ENST00000557548 323 ntBASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.01□□□□□ -2.09
SHANK2Q9UPX8 BNIP3P4-201ENST00000604946 565 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms