Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL139421.1-201ENST00000423010 169 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 MTCO1P3-201ENST00000429327 192 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 ATP5F1P1-201ENST00000433775 569 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 BNIP3P2-201ENST00000441221 577 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AP1S2P1-201ENST00000457344 379 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 FAM172BP-201ENST00000487497 1089 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 HSPA8P13-201ENST00000523715 472 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 UBTFL10-201ENST00000528532 562 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL391261.3-201ENST00000557194 520 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC090615.1-201ENST00000577519 154 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC011451.2-201ENST00000604303 598 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC103810.6-201ENST00000606708 136 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AL158211.4-201ENST00000606988 584 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 OR10AB1P-201ENST00000609613 938 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC005332.6-201ENST00000613178 446 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 AC107982.1-201ENST00000507171 1300 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC062016.1-201ENST00000355719 319 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 RNU6-28P-201ENST00000362378 107 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MIR524-201ENST00000385242 87 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL603865.2-201ENST00000401679 213 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL451062.2-201ENST00000427515 271 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 RPS15AP28-201ENST00000435088 386 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC108938.1-201ENST00000451204 136 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC097462.2-201ENST00000504623 481 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 XKRY-201ENST00000510392 1100 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 SNORA31.18-201ENST00000517043 134 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 SNORA70.24-201ENST00000517233 118 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MTCO3P15-201ENST00000526563 574 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MIR4319-201ENST00000577285 85 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 VN1R87P-201ENST00000596706 487 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL390208.1-201ENST00000605885 644 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MIR6798-201ENST00000612887 67 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL512506.1-201ENST00000613918 449 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 HMGB1P24-202ENST00000615653 685 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AC120349.2-201ENST00000625002 298 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
VAPAQ9P0L0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VAPAQ9P0L0 AL356473.1-201ENST00000406203 1408 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 Y_RNA.548-201ENST00000384656 105 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 RNU2-42P-201ENST00000410697 113 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 RN7SKP140-201ENST00000411196 284 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC092047.1-201ENST00000424997 240 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC007919.1-201ENST00000429380 217 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 Z82210.1-201ENST00000440037 231 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 PIGFP3-201ENST00000441918 722 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC025750.2-201ENST00000442609 450 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 CBWD4P-201ENST00000445695 655 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC079776.3-201ENST00000450665 370 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 RPS3P1-201ENST00000456781 192 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC107626.1-201ENST00000471084 183 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC026414.1-201ENST00000504046 698 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC114786.4-201ENST00000508771 728 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC114797.1-201ENST00000514003 728 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC105137.2-201ENST00000569073 466 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms