Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 VN1R104P-201ENST00000505115 1009 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 MTND4P2-201ENST00000507767 1203 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC109464.2-201ENST00000510242 943 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC010265.1-201ENST00000513509 211 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC022483.1-201ENST00000514020 567 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC022878.1-201ENST00000530684 149 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AP003122.4-201ENST00000530980 758 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AL133153.1-201ENST00000557756 303 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 TGIF1P1-201ENST00000558095 802 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC015917.1-201ENST00000579654 510 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC009977.1-201ENST00000586015 570 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC040904.1-201ENST00000590850 223 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC106900.2-201ENST00000604994 317 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC138749.5-201ENST00000611461 208 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC116165.2-201ENST00000616705 206 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC009878.1-201ENST00000621819 340 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 AC099654.13-201ENST00000639774 207 ntBASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SPHK1Q9NYA1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC017071.1-201ENST00000564407 2204 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 Y_RNA.436-201ENST00000384097 102 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RNU6-297P-201ENST00000384636 107 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RPS3AP36-201ENST00000398190 775 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL353777.1-201ENST00000425552 326 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 HMGN2P20-201ENST00000437531 273 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RPL17P49-201ENST00000443728 411 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 MTND1P9-201ENST00000453775 944 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RNA5SP269-201ENST00000459032 137 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RPS27AP1-201ENST00000475545 471 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC012181.1-201ENST00000479895 423 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 MTND1P3-201ENST00000484956 952 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL049874.1-201ENST00000489560 388 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC114797.1-201ENST00000514003 728 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 SNORA31.22-201ENST00000517204 135 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC107934.1-201ENST00000522215 217 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AP000857.1-201ENST00000532151 543 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 RPL21P5-201ENST00000554662 472 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 MIR3611-201ENST00000584484 83 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 CKS1BP3-201ENST00000600888 237 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL606834.2-201ENST00000602954 668 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC098614.4-201ENST00000607601 462 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 BX664608.1-201ENST00000610519 487 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC092140.2-201ENST00000618027 521 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 MIR6130-201ENST00000619419 109 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AC110801.1-201ENST00000623590 212 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPHK1Q9NYA1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 TEX21P-201ENST00000447107 1476 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RNY4P34-201ENST00000364779 95 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AL136372.1-201ENST00000403060 228 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 SNORA11.1-201ENST00000408133 129 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RNU6-195P-201ENST00000411352 109 ntBASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.17□□□□□ -1.9
SPHK1Q9NYA1 RPS15AP12-201ENST00000419498 388 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms