Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC103710.4-201ENST00000609301 899 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 AC079395.3-201ENST00000615161 484 ntBASIC2.58□□□□□ -2
KLHL28Q9NXS3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
KLHL28Q9NXS3 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 TPMTP3-201ENST00000411928 735 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC092047.1-201ENST00000424997 240 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 AL445687.1-201ENST00000439946 251 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC093156.1-201ENST00000440382 670 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 BNIP3P2-201ENST00000441221 577 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 RPS24P13-201ENST00000442520 397 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 CBWD4P-201ENST00000445695 655 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC002381.1-201ENST00000447049 280 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 MTCO2P25-201ENST00000447065 681 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 RPL30P9-201ENST00000465586 330 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.57□□□□□ -2
KLHL28Q9NXS3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 AP001025.2-201ENST00000490908 477 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC008837.2-201ENST00000513076 418 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 COX6CP8-201ENST00000522620 226 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 GLYCAM1-201ENST00000546596 285 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC090079.2-201ENST00000575289 768 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC009163.5-201ENST00000575421 637 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 MTCO3P13-201ENST00000577757 781 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 VN1R90P-201ENST00000595717 726 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AC024153.1-201ENST00000603103 365 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 OR2AS2P-201ENST00000606902 342 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 AL138478.1-201ENST00000612252 832 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.57□□□□□ -2
KLHL28Q9NXS3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KLHL28Q9NXS3 AP000720.1-201ENST00000625091 483 ntBASIC2.57□□□□□ -2
KLHL28Q9NXS3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.57□□□□□ -2
KLHL28Q9NXS3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
KLHL28Q9NXS3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.56□□□□□ -2
KLHL28Q9NXS3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL161781.1-201ENST00000354277 403 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 SNORA18.3-201ENST00000384122 132 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL449283.1-202ENST00000418249 604 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 Z82210.1-201ENST00000440037 231 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 RPL23AP76-201ENST00000441860 458 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 RPL37P4-201ENST00000448908 268 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC010376.1-201ENST00000522101 334 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AP003497.1-201ENST00000528472 562 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.56□□□□□ -2
KLHL28Q9NXS3 MIR4298-201ENST00000584380 73 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC004987.4-201ENST00000603383 338 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC093838.1-201ENST00000613014 469 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AC013476.2-201ENST00000614456 459 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 AL390862.1-201ENST00000635467 1469 ntBASIC2.56□□□□□ -2
KLHL28Q9NXS3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
KLHL28Q9NXS3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.56□□□□□ -2
KLHL28Q9NXS3 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 RNU6-741P-201ENST00000383889 107 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 RNU6-637P-201ENST00000384050 107 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 TAS2R15P-201ENST00000390674 928 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 U3.20-201ENST00000390909 217 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 BX119904.4-201ENST00000424402 301 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 AL049734.2-201ENST00000441066 616 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 MTND5P14-201ENST00000441481 1267 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.55□□□□□ -2
KLHL28Q9NXS3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.55□□□□□ -2
KLHL28Q9NXS3 DDX3P2-201ENST00000446138 111 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 DPPA3P1-201ENST00000448050 469 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 ASNSP3-201ENST00000451989 1306 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 MTND1P9-201ENST00000453775 944 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.55□□□□□ -2
KLHL28Q9NXS3 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
KLHL28Q9NXS3 FAM172BP-201ENST00000487497 1089 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms