Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC006213.4-201ENST00000616184 634 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AL512427.1-201ENST00000618593 349 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 AC005858.4-201ENST00000623191 700 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 MIR1322-201ENST00000638013 71 ntBASIC2.35□□□□□ -2.03
TREX1Q9NSU2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TREX1Q9NSU2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 SDAD1P2-201ENST00000441308 2028 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RNU5A-1-201ENST00000362698 116 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RNU6-216P-201ENST00000363282 104 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 Y_RNA.578-201ENST00000390903 88 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RPS3AP24-201ENST00000407896 734 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AL450338.1-201ENST00000407987 512 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 NANOGP5-201ENST00000424456 877 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AL365496.1-201ENST00000426885 215 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC090774.1-201ENST00000435925 246 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 PTGES3P1-201ENST00000439531 483 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RPL26P6-201ENST00000440913 438 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 HMGN1P5-201ENST00000448591 263 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 RNU6-420P-201ENST00000458780 107 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC069306.1-201ENST00000507006 843 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 SUB1P1-201ENST00000524415 382 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC006023.1-201ENST00000603944 259 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC080013.4-201ENST00000607624 649 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC124016.2-201ENST00000610058 665 ntBASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.34□□□□□ -2.03
TREX1Q9NSU2 AC097714.1-201ENST00000511272 1647 ntBASIC2.34□□□□□ -2.04
TREX1Q9NSU2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TREX1Q9NSU2 AL365361.1-201ENST00000566942 3481 ntBASIC2.34□□□□□ -2.04
TREX1Q9NSU2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.34□□□□□ -2.04
TREX1Q9NSU2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AL591416.1-201ENST00000404015 867 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC069282.1-201ENST00000411911 526 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 CCDC58P2-201ENST00000417131 366 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 MTCYBP45-201ENST00000435243 565 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC011753.1-201ENST00000451001 220 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC126389.1-201ENST00000477436 290 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AL135752.1-201ENST00000479477 471 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 RNU1-103P-201ENST00000516502 125 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 RNU6-928P-201ENST00000516876 104 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC092451.2-201ENST00000538746 658 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 TRAV28-201ENST00000557548 323 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 HSPE1P3-201ENST00000559254 309 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 MTND4LP25-201ENST00000570218 163 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 RPL21P136-201ENST00000605378 396 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC104237.2-201ENST00000612456 443 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC079395.3-201ENST00000615161 484 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AL450472.3-201ENST00000615578 367 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC073308.1-201ENST00000623696 305 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC120349.2-201ENST00000625002 298 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 AC243829.7-201ENST00000633081 225 ntBASIC2.33□□□□□ -2.04
TREX1Q9NSU2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms