Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AP000873.5-201ENST00000533906 236 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 RPP40P2-201ENST00000603596 712 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL356280.1-201ENST00000603614 379 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AP005137.2-201ENST00000609238 400 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 VN1R74P-201ENST00000613259 503 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AC079395.3-201ENST00000615161 484 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CISHQ9NSE2 AL022578.1-201ENST00000439330 1433 ntBASIC1.97□□□□□ -2.09
CISHQ9NSE2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 SNORD51-201ENST00000384320 80 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 MTND1P23-201ENST00000416931 372 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 TPTE2P1-204ENST00000435256 593 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC007000.2-201ENST00000442564 487 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 MTCYBP3-201ENST00000445588 1137 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 MTND5P8-201ENST00000449817 1083 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AL139109.1-201ENST00000455491 297 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 RPL30P5-201ENST00000494923 336 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC008427.1-201ENST00000503102 655 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 HMGN1P28-201ENST00000521340 364 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 ARL2BPP5-201ENST00000523141 481 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 NDUFS5P6-201ENST00000529136 295 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 ADAM3B-201ENST00000569937 840 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 BPTFP1-201ENST00000579209 492 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AL590099.1-201ENST00000615276 138 ntBASIC1.96□□□□□ -2.1
CISHQ9NSE2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.96□□□□□ -2.1
CISHQ9NSE2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CISHQ9NSE2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 RNU6-270P-201ENST00000364131 105 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 AL358075.3-201ENST00000426289 226 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 HMGN2P3-201ENST00000433603 273 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC090774.1-201ENST00000435925 246 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 HMGN2P5-201ENST00000436882 273 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 RPS15AP27-201ENST00000449183 343 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC107626.1-201ENST00000471084 183 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 RNU6-416P-201ENST00000516265 103 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 IGLV3-17-201ENST00000519099 244 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 ATP5F1P5-201ENST00000526403 760 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC007115.1-201ENST00000546853 234 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 MIR3921-201ENST00000577308 85 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 SNORD39.3-201ENST00000584451 71 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AL022099.1-201ENST00000604551 712 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC002487.1-201ENST00000604565 994 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC093673.2-201ENST00000609674 331 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC016911.1-201ENST00000613297 452 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC005858.4-201ENST00000623191 700 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC091925.2-201ENST00000625059 256 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.95□□□□□ -2.1
CISHQ9NSE2 AC004944.1-201ENST00000517807 3059 ntBASIC1.95□□□□□ -2.1
CISHQ9NSE2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CISHQ9NSE2 AL356292.1-201ENST00000283110 373 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 MIR1290-201ENST00000408735 78 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC098614.2-201ENST00000426040 255 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC010095.1-201ENST00000443543 144 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 snoU13.26-201ENST00000459452 105 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.94□□□□□ -2.1
CISHQ9NSE2 MTCYBP17-201ENST00000503579 789 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC006390.1-201ENST00000508068 283 ntBASIC1.94□□□□□ -2.1
CISHQ9NSE2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms