Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTCO3P18-201ENST00000440206 761 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 FDX1P2-201ENST00000450769 375 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC108059.3-201ENST00000456388 214 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RNU6-420P-201ENST00000458780 107 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC079382.1-201ENST00000493346 557 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RNU6-1095P-201ENST00000516148 108 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RNU6-352P-201ENST00000516908 107 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL359212.1-201ENST00000556608 614 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL158211.4-201ENST00000606988 584 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC008536.2-201ENST00000607284 349 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AL008636.1-201ENST00000625038 1018 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC005609.4-201ENST00000625071 447 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 AC244517.1-201ENST00000606030 2086 ntBASIC3.89□□□□□ -1.79
USP29Q9HBJ7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
USP29Q9HBJ7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AP004289.2-201ENST00000444413 1457 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 XIAPP3-201ENST00000312918 795 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU6-511P-201ENST00000363496 107 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 SNORA70.4-201ENST00000365509 134 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU6-74P-201ENST00000384235 107 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU6-908P-201ENST00000410160 94 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AL109913.1-201ENST00000421173 514 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC137499.1-201ENST00000427602 88 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 GPR143P-201ENST00000434155 205 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RNU7-59P-201ENST00000459101 61 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC105224.1-201ENST00000587055 421 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC007621.1-201ENST00000604544 437 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC093788.1-201ENST00000609356 927 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 uc_338.32-201ENST00000615087 172 ntBASIC3.88□□□□□ -1.79
USP29Q9HBJ7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
USP29Q9HBJ7 AL645937.1-201ENST00000641739 1652 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.22-201ENST00000362492 102 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNA5SP119-201ENST00000362715 117 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNY1P12-201ENST00000364251 105 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU6-1322P-201ENST00000364309 107 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU6-39P-201ENST00000384344 107 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 MIR1-2-201ENST00000384961 85 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 SNORA11.1-201ENST00000408133 129 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU6-712P-201ENST00000410558 100 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RNU2-62P-201ENST00000410868 191 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RAB9AP3-201ENST00000412737 573 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC009237.5-201ENST00000414271 501 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 GOT2P5-201ENST00000433995 546 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 DPPA3P1-201ENST00000448050 469 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 RAB9AP1-201ENST00000449393 573 ntBASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.87□□□□□ -1.79
USP29Q9HBJ7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms