Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AP004247.1-201ENST00000531556 1289 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 ELOCP31-201ENST00000540463 467 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 MIR4307-201ENST00000582802 84 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AL669831.4-202ENST00000590817 238 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AL021997.1-201ENST00000605757 193 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC005332.10-201ENST00000612725 619 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC027807.2-201ENST00000616099 408 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC091953.5-201ENST00000622919 233 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 AC006378.2-201ENST00000623178 2476 ntBASIC3.54□□□□□ -1.84
UPF2Q9HAU5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UPF2Q9HAU5 Z82195.2-201ENST00000612348 18351 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RNU4-91P-201ENST00000364778 135 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RNU6-339P-201ENST00000384310 107 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MIR670-201ENST00000390142 98 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 SNORA26.7-201ENST00000391288 122 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL389915.1-201ENST00000422463 466 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RPS27AP14-201ENST00000422868 454 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC007742.1-201ENST00000425789 329 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RPL21P66-201ENST00000426566 466 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MTCYBP45-201ENST00000435243 565 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 ELOCP26-201ENST00000436067 329 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 VN1R34P-201ENST00000447387 883 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 snoU13.3-201ENST00000459441 104 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC117440.1-201ENST00000474107 571 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RN7SL499P-201ENST00000481141 276 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC006483.1-201ENST00000487308 313 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC093767.1-201ENST00000504523 156 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MTND2P33-201ENST00000506452 1031 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC093677.1-201ENST00000514414 678 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 FABP5P5-201ENST00000515537 406 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 SNORA31.26-201ENST00000517250 137 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MTCO3P24-201ENST00000572729 782 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MIR4444-1-201ENST00000581696 74 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MIR4444-2-201ENST00000584390 74 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL133393.1-201ENST00000603277 287 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL136363.2-201ENST00000604173 851 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 AC099842.1-201ENST00000619919 596 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 CYP3A51P-201ENST00000633513 256 ntBASIC3.53□□□□□ -1.84
UPF2Q9HAU5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UPF2Q9HAU5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 U8.14-201ENST00000390843 143 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 RNA5SP56-201ENST00000410277 118 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 RNU2-16P-201ENST00000410712 136 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 RNU6-248P-201ENST00000410720 107 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 TOMM22P1-201ENST00000418578 312 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AL159987.2-201ENST00000432754 307 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 MTND1P34-201ENST00000438556 671 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC127537.2-201ENST00000439258 465 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 Z75741.1-201ENST00000446793 314 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AP000542.1-201ENST00000448473 371 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 VN1R17P-201ENST00000472048 1090 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC012181.1-201ENST00000479895 423 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 OR5H5P-201ENST00000503164 928 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 ARL2BPP4-201ENST00000506854 471 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC025881.1-201ENST00000518851 512 ntBASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.52□□□□□ -1.85
UPF2Q9HAU5 AL163153.1-201ENST00000554223 283 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms