Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ELOCP30-201ENST00000447108 299 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 BET1P1-201ENST00000482276 359 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 RNU6-1256P-201ENST00000516539 103 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC106038.2-201ENST00000520706 568 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC007834.2-201ENST00000536310 343 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AL355836.1-201ENST00000555951 870 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 RPL23AP84-201ENST00000571193 464 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC005951.1-201ENST00000576706 485 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 MIR3609-201ENST00000582661 80 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 CKS1BP3-201ENST00000600888 237 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 HSPE1P7-201ENST00000604681 321 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AL355472.4-201ENST00000610233 626 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC027807.2-201ENST00000616099 408 ntBASIC3.04□□□□□ -1.92
UBQLN3Q9H347 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBQLN3Q9H347 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 SRP72P2-201ENST00000344851 1979 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RNU6-533P-201ENST00000384144 107 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RNU6-278P-201ENST00000390945 109 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC110754.1-201ENST00000399740 601 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RPS20P2-201ENST00000402520 389 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 BMI1P1-201ENST00000445879 941 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RNU7-59P-201ENST00000459101 61 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RPL23AP41-201ENST00000484754 458 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RPL30P5-201ENST00000494923 336 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 RNU6-1003P-201ENST00000517099 105 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 OSBPL9P5-201ENST00000542581 171 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 DNAJC8P1-201ENST00000554535 372 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 MIR5195-201ENST00000583555 115 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC105129.3-201ENST00000605455 485 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 YPEL5P2-201ENST00000605553 359 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC010133.1-201ENST00000615809 842 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 AC090132.2-201ENST00000615881 347 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 MIR7112-201ENST00000616126 65 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.03□□□□□ -1.92
UBQLN3Q9H347 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
UBQLN3Q9H347 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.03□□□□□ -1.93
UBQLN3Q9H347 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 RNU6-1027P-201ENST00000383998 107 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 SNORA11.1-201ENST00000408133 129 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 RPL21P24-201ENST00000413752 448 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 Z99497.1-201ENST00000421282 135 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 UBE2D3P4-201ENST00000441973 436 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 MTCO3P45-201ENST00000443036 613 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 Z75741.1-201ENST00000446793 314 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 RPS20P20-201ENST00000460498 340 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AC008481.1-201ENST00000463278 396 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 SETP11-201ENST00000473027 690 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AC068724.1-201ENST00000487100 792 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 DSTNP2-201ENST00000504533 515 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.02□□□□□ -1.93
UBQLN3Q9H347 APOOP4-201ENST00000513530 597 ntBASIC3.02□□□□□ -1.93
UBQLN3Q9H347 AC068657.1-201ENST00000520807 306 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms