Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 OR10R1P-201ENST00000441524 1141 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 USP9YP8-201ENST00000441913 500 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 DDX3P2-201ENST00000446138 111 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 RPL23AP3-201ENST00000453844 468 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 snoU109.1-201ENST00000459339 135 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC025181.1-201ENST00000477507 416 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC011611.5-201ENST00000552477 578 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AL133241.1-201ENST00000556832 487 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 MTATP6P25-201ENST00000574491 261 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC106052.1-201ENST00000608029 497 ntBASIC1.91□□□□□ -2.1
VCX3BQ9H321 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3BQ9H321 AL049641.1-201ENST00000441055 1948 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AL691517.1-201ENST00000440833 1235 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 BMI1P1-201ENST00000445879 941 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC103987.1-201ENST00000473394 348 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 SNORA48.9-201ENST00000516419 162 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC103783.1-201ENST00000520506 373 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC124293.1-201ENST00000530034 493 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 OR5AL2P-201ENST00000532185 920 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 BPTFP1-201ENST00000579209 492 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC015688.2-201ENST00000584523 262 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.9□□□□□ -2.11
VCX3BQ9H321 AC007038.2-201ENST00000608095 740 ntBASIC1.9□□□□□ -2.11
VCX3BQ9H321 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3BQ9H321 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3BQ9H321 RNU6-1159P-201ENST00000362933 107 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 RNU6-619P-201ENST00000365146 108 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 SNORA44-201ENST00000384584 132 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AL121978.1-201ENST00000402778 359 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AL161449.1-201ENST00000414531 1199 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.89□□□□□ -2.11
VCX3BQ9H321 AC019097.1-201ENST00000424783 735 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 ZFAND6P1-201ENST00000434138 605 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.89□□□□□ -2.11
VCX3BQ9H321 RPL21P47-201ENST00000483696 477 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AC074250.1-201ENST00000511117 192 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3BQ9H321 UBTFL10-201ENST00000528532 562 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 LINC00933-203ENST00000559812 219 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
VCX3BQ9H321 MIR4700-201ENST00000578311 74 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 SNORD39.3-201ENST00000584451 71 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 KATNBL1P5-201ENST00000605015 517 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AL021997.1-201ENST00000605757 193 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 AC068831.8-201ENST00000620171 435 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 ELF2P3-201ENST00000445099 1506 ntBASIC1.89□□□□□ -2.11
VCX3BQ9H321 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3BQ9H321 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCX3BQ9H321 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 RNU4-42P-201ENST00000364738 142 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 MIR16-1-201ENST00000385271 89 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VCX3BQ9H321 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCX3BQ9H321 RNU2-52P-201ENST00000410680 190 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AC023141.4-201ENST00000412031 328 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 MICF-203ENST00000432679 129 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 RNA5SP356-201ENST00000515972 94 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 SNORA76.2-201ENST00000517095 137 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 ZNF705CP-201ENST00000530515 889 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL391261.3-201ENST00000557194 520 ntBASIC1.88□□□□□ -2.11
VCX3BQ9H321 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3BQ9H321 MIR4325-201ENST00000583049 90 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms