Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC007998.5-201ENST00000622938 237 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC110801.1-201ENST00000623590 212 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 AC010332.2-201ENST00000613083 1904 ntBASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3Q9BZ76 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 RNA5SP478-201ENST00000364657 115 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 SNORD63-201ENST00000384262 68 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 MT-TC-201ENST00000387405 66 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 SNORA40-201ENST00000388090 126 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 PIGFP3-201ENST00000441918 722 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC023424.1-201ENST00000496058 459 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AP002001.1-203ENST00000534002 267 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC023824.2-201ENST00000566185 400 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC069307.1-201ENST00000602820 447 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AL008718.3-201ENST00000610217 321 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AP005432.1-201ENST00000580891 3485 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 AC092070.2-203ENST00000598377 3644 ntBASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3Q9BZ76 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC020633.1-201ENST00000468439 2247 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 SNORA17.1-201ENST00000362945 126 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 MIR433-201ENST00000384837 93 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 RNU6-821P-201ENST00000390995 107 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AL591043.1-201ENST00000432461 424 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 GAPDHP27-201ENST00000447427 1020 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 SNORD2.1-201ENST00000458762 69 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 RNU6-1012P-201ENST00000516606 109 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC087369.1-201ENST00000520775 996 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 MIR6130-201ENST00000619419 109 ntBASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3Q9BZ76 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 RNU1-64P-201ENST00000365443 163 ntBASIC5.29□□□□□ -1.56
CNTNAP3Q9BZ76 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms