Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 RNU6-512P-201ENST00000364438 103 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 SNORA62-201ENST00000365493 153 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.414-201ENST00000384011 101 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.509-201ENST00000384506 99 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL591848.1-201ENST00000413092 322 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL592045.1-201ENST00000429867 352 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 DYNLL1P5-201ENST00000467158 270 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 RN7SL385P-201ENST00000468873 276 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC090151.1-201ENST00000520784 730 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AP001804.3-201ENST00000525146 880 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC243960.4-201ENST00000600532 288 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AL161798.1-201ENST00000604630 131 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC015813.4-201ENST00000610469 179 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 DUSP12P1-201ENST00000612874 516 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC083809.1-201ENST00000615051 472 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC103705.1-201ENST00000619013 241 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM55Q9BYV6 AC116096.1-201ENST00000566804 2314 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RPL32P3-201ENST00000359025 275 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.184-201ENST00000363884 108 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.399-201ENST00000383955 105 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RNU6-434P-201ENST00000384376 107 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP219-201ENST00000390940 113 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP332-201ENST00000391063 115 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RN7SKP100-201ENST00000411258 284 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RNU2-71P-201ENST00000411395 189 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 CYP4F29P-201ENST00000420685 446 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC008264.1-201ENST00000447612 367 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 TPT1P12-201ENST00000448968 492 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 PPP1R2P5-201ENST00000457256 603 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 HIGD1AP13-201ENST00000509878 289 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RNU2-69P-201ENST00000516061 100 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AP001880.2-201ENST00000538233 448 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AP000763.2-201ENST00000540641 163 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC011611.1-201ENST00000552179 197 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AC020910.3-201ENST00000603701 874 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 Z82243.1-201ENST00000609432 473 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 U2.17-201ENST00000611454 95 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 RMST_7.1-201ENST00000621935 268 ntBASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM55Q9BYV6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC008568.2-201ENST00000623862 2313 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 ZNF285B-201ENST00000561698 1767 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 RPL21P91-201ENST00000429231 479 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 RPS24P13-201ENST00000442520 397 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 OR1H1P-201ENST00000448731 937 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 RPL21P41-201ENST00000459863 264 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 VN1R17P-201ENST00000472048 1090 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 SUMO2P6-201ENST00000505273 288 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC009901.1-201ENST00000506703 541 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 PPBPP1-201ENST00000510807 373 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 RN7SKP289-201ENST00000517244 295 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms