Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 Y_RNA.88-201ENST00000363029 99 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 RNA5SP322-201ENST00000363617 119 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 RNY3P3-201ENST00000363816 102 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 Y_RNA.255-201ENST00000364581 97 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 RNU1-89P-201ENST00000384592 164 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 MIR141-201ENST00000384975 95 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 HSPE1P12-201ENST00000412576 301 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC093106.2-201ENST00000428212 385 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 GMFBP1-201ENST00000467831 427 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 RPL31P13-201ENST00000484151 370 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AL163973.1-201ENST00000484753 577 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 RNA5SP503-201ENST00000517047 117 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 MED28P6-201ENST00000558776 231 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC006270.2-201ENST00000578523 652 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC020914.4-201ENST00000597690 277 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 MIR6810-201ENST00000622701 70 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC025034.2-201ENST00000623264 286 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AL773545.4-201ENST00000637262 310 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 AL513478.4-201ENST00000641636 310 ntBASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM54Q9BYV2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.96□□□□□ -1.77
TRIM54Q9BYV2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.96□□□□□ -1.77
TRIM54Q9BYV2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 RNU6-600P-201ENST00000362524 99 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 SNORD37.1-201ENST00000390968 65 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 RNU6-387P-201ENST00000411331 105 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC018630.2-202ENST00000422992 927 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC020550.1-201ENST00000447385 163 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 VN1R34P-201ENST00000447387 883 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 MTND1P18-201ENST00000448191 573 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC009220.1-201ENST00000451614 275 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC069439.1-201ENST00000494739 167 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC146944.2-203ENST00000502493 354 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 PCBP2P3-201ENST00000509726 843 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC108078.2-201ENST00000510750 236 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC139495.1-202ENST00000513164 354 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 RNA5SP401-201ENST00000515920 127 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 SNORA31.9-201ENST00000516429 84 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AP004242.1-201ENST00000533701 349 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC023575.1-201ENST00000580510 358 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AP002826.1-201ENST00000608835 315 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 DISC2.1-201ENST00000612827 205 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AL445567.2-201ENST00000618935 498 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 uc_338.11-201ENST00000619132 160 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC068831.8-201ENST00000620171 435 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC024940.5-201ENST00000622889 474 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 AC007998.5-201ENST00000622938 237 ntBASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM54Q9BYV2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 SNORA31-201ENST00000362607 130 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 SMIM11P1-201ENST00000369586 178 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 RNU6-946P-201ENST00000383878 107 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 SNORA24.1-201ENST00000384401 135 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 FGF7P8-201ENST00000402994 292 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL356967.1-201ENST00000406305 431 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC114491.1-201ENST00000416095 246 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 NEFMP1-201ENST00000443423 1006 ntBASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM54Q9BYV2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms